Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq197 82.4 9e-14 seq143 82.4 9e-14 seq569 78.8 1e-12 >seq197 Length=64906 Score = 82.4 bits (90), Expect = 9e-14 Identities = 84/106 (79%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 10 AAACCAAC-AAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 |||||||| |||||||| || | ||| |||| ||||||||||||||| |||| || Sbjct 41688 AAACCAACTAAAATAGG-ACTAAAGTCATATTTCATTATTCCATGCTAACACATTCAAGC 41746 Query 69 GTAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 ||| ||||||||| |||||||| |||| |||| ||||| |||| Sbjct 41747 TTAAAAGCCTGCTTTAAACACTCTGATTTGCTCATGGTAATTGTCC 41792 >seq143 Length=76570 Score = 82.4 bits (90), Expect = 9e-14 Identities = 84/106 (79%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 10 AAACCAAC-AAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 |||||||| |||||||| || | ||| |||| ||||||||||||||| |||| || Sbjct 1150 AAACCAACGAAAATAGG-ACTAAAGTCATATTTCATTATTCCATGCTAACACATTCAAGC 1208 Query 69 GTAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 ||| ||||||||| |||||||| |||| |||| ||||| |||| Sbjct 1209 TTAAAAGCCTGCTTTAAACACTCTGATTTGCTCATGGTAATTGTCC 1254 >seq569 Length=30398 Score = 78.8 bits (86), Expect = 1e-12 Identities = 83/106 (78%), Gaps = 4/106 (4%) Strand=Plus/Plus Query 10 AAACCAAC-AAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 |||||||| |||||||| || | ||| |||| ||||||||||||||| |||| || Sbjct 749 AAACCAACGAAAATAGG-ACTAAAGTCATATTTCATTATTCCATGCTAACACATTCAAGC 807 Query 69 GTAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCC 112 ||| ||||||||| ||| |||| |||| |||| ||||| |||| Sbjct 808 TTAAAAGCCTGCTTTAAACGCTCTGATTTGCTCATGGTAATTGTCC 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595191039636