Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq698 143 4e-32 seq375 143 4e-32 seq183 129 1e-27 seq120 129 1e-27 seq732 125 1e-26 seq100 125 1e-26 seq146 91.5 2e-16 seq134 91.5 2e-16 >seq698 Length=24204 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 12461 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 12404 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 12403 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 12346 >seq375 Length=42179 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 12005 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 12062 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 12063 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 12120 >seq183 Length=67375 Score = 129 bits (142), Expect = 1e-27 Identities = 103/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGC-AG 59 |||||||||||||| | ||||||| ||||| || |||||||||| ||| |||| | Sbjct 42943 GTACGAGAGGAACC-CTTCATTCAGA-TAATTTGTATTTGCGGCTGGTTGAA-AGGCTAA 42887 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 42886 TACCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCATCTAAGTCAGAATCCATGC 42828 >seq120 Length=82043 Score = 129 bits (142), Expect = 1e-27 Identities = 101/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| ||||||| |||||||||| ||| | || | Sbjct 75218 GTACGAGAGGAACC-CTTCATTCAGAG-AATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 75275 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| Sbjct 75276 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTACGTCAGAATCCGTGC 75333 >seq732 Length=22771 Score = 125 bits (138), Expect = 1e-26 Identities = 83/92 (90%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 27 ATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATT 86 ||||||||| |||||||||| ||| | || |||||||||||||||||||||||||| Sbjct 14797 ATAATTGGTATTTGCGGCTGGTTGAAAGGCCAATGCCGCGAAGCTACCATCTGCTGGATA 14856 Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||||||||||||||||||||||||||||| Sbjct 14857 ATGGCTGAACGCCTCTAAGTCAGAATCCATGC 14888 >seq100 Length=88144 Score = 125 bits (138), Expect = 1e-26 Identities = 97/113 (86%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 6 AGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGC 65 ||||||||| | ||||||| |||||||| |||||||||| ||| | || |||||| Sbjct 65315 AGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAATGCCGC 65372 Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || ||||||||||||||||| ||||||||||||| |||||||||||||||||| Sbjct 65373 GACGCTACCATCTGCTGGATAATGGCTGAACGCCCCTAAGTCAGAATCCATGC 65425 >seq146 Length=75564 Score = 91.5 bits (100), Expect = 2e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 ||||||| | |||||||| ||| | || |||||||| ||||||| ||||||||| || Sbjct 24036 AATTGGTATATGCGGCTGGTTGAAAGGCCAATGCCGCGATGCTACCAGCTGCTGGATAAT 23977 Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||| ||||| |||||| |||| Sbjct 23976 AGCTGAACGCCTATAAGTAAGAATCAATGC 23947 >seq134 Length=78902 Score = 91.5 bits (100), Expect = 2e-16 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 21727 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 21670 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATG 89 ||||||||||||||||||||||||| ||| Sbjct 21669 GCCGCGAAGCTACCATCTGCTGGATAATG 21641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819187667456