Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F000825725.1_202014-12-08] 1,554 sequences; 49,238,270 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq1007 98.7 3e-16 seq11 89.7 2e-13 seq369 80.6 8e-11 >seq1007 Length=13468 Score = 98.7 bits (108), Expect = 3e-16 Identities = 114/152 (75%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 || || |||||||| ||||||||||||||| | ||||| |||||| ||| |||| | Sbjct 6362 GTTTCCCACCGTTCTGGTGAAACTGAAGATACCACAATTGCTGATCTTGTTGTTGGTCTT 6303 Query 2833 AACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 |||||||||| ||||| ||| || |||| | | ||| ||| | ||||| | Sbjct 6302 CGTACTGGTCAAATCAAGACTGGTGCTCCTTGTA--GAAGTGAACGTTTGGCTAAGCTTA 6245 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGT 2922 |||||||||||||||| ||||| ||| | ||| Sbjct 6244 ACCAATTGCTTCGTATTGAAGAACAATTGGGT 6213 >seq11 Length=172998 Score = 89.7 bits (98), Expect = 2e-13 Identities = 112/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 || || |||||||| ||||| ||||||||| | ||||| |||||| ||| |||| | Sbjct 129723 GTTTCCCACCGTTCTGGTGAGACTGAAGATACCACAATTGCTGATCTTGTTGTTGGTCTT 129782 Query 2833 AACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 | |||||||| ||||| ||| || |||| | | ||| ||| | ||||| | Sbjct 129783 CGTACCGGTCAAATCAAGACTGGTGCTCCTTGTA--GAAGTGAGCGTTTGGCTAAGCTTA 129840 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGT 2922 |||||||||||||||| ||||| ||| | ||| Sbjct 129841 ACCAATTGCTTCGTATTGAAGAACAATTGGGT 129872 >seq369 Length=42798 Score = 80.6 bits (88), Expect = 8e-11 Identities = 112/155 (72%), Gaps = 4/155 (3%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTG--CAA 2830 || || ||| | || ||||||||||||||| | || || |||||| ||| || | | Sbjct 4445 GTCTCTCACAGATCTGGTGAAACTGAAGATACTACCATTGCTGATCTTGTCGTCGGTCTC 4504 Query 2831 CTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 | | |||||||||| ||||| ||| | | ||| |||| ||| |||| || |||| Sbjct 4505 CGTA--CTGGTCAAATCAAGACTGGTGCCCCTTGCCGTTCTGAACGTCTTGCCAAGTACA 4562 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGTGAA 2925 ||||| | || ||||| ||||| || | |||||| Sbjct 4563 ACCAACTTCTCCGTATTGAAGAAGAATTGGGTGAA 4597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156035520506376