Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq441 143 4e-32 seq25 143 4e-32 seq64 93.3 7e-17 >seq441 Length=18510 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 11045 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 11102 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 11103 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 11160 >seq25 Length=399763 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 19753 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 19810 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 19811 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 19868 >seq64 Length=116159 Score = 93.3 bits (102), Expect = 7e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| Sbjct 102766 TGCCGCGAAGCTACCATCTGCTGGATAATGGGTGAAGGCCTCTAAGTCAGAATCCATGC 102708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819189000704