Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20[genbank_20GCA_5F900000135.1_202014-11-26] 1,386 sequences; 49,591,775 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq205 98.7 3e-16 seq3 89.7 2e-13 >seq205 Length=47901 Score = 98.7 bits (108), Expect = 3e-16 Identities = 115/152 (76%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 || || |||||||| ||||| ||||||||| | |||||||||||| ||| |||| | Sbjct 22543 GTTTCCCACCGTTCTGGTGAGACTGAAGATACCACAATCGCTGATCTTGTCGTTGGTCTT 22602 Query 2833 AACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 |||||||||| ||||| ||| || ||| || | | ||| ||| | ||||| | Sbjct 22603 CGTACTGGTCAAATCAAGACTGGTGCTCCTTG-CA-GAAGTGAGCGTTTGGCTAAGCTTA 22660 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGT 2922 |||||||||||||||| ||||| ||| | ||| Sbjct 22661 ACCAATTGCTTCGTATTGAAGAACAATTGGGT 22692 >seq3 Length=1262620 Score = 89.7 bits (98), Expect = 2e-13 Identities = 112/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 || || |||||||| ||||| ||||||||| | ||||| |||||| ||| |||| | Sbjct 859927 GTTTCCCACCGTTCTGGTGAGACTGAAGATACCACAATTGCTGATCTTGTTGTTGGTCTT 859986 Query 2833 AACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 | |||||||| ||||| ||| || |||| | | ||| ||| | ||||| | Sbjct 859987 CGTACCGGTCAAATCAAGACTGGTGCTCCTTGTA--GAAGTGAGCGTTTGGCTAAGCTTA 860044 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGT 2922 |||||||||||||||| ||||| ||| | ||| Sbjct 860045 ACCAATTGCTTCGTATTGAAGAACAATTGGGT 860076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156035831802984