Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq70 300 1e-76 seq106 212 5e-50 >seq70 Length=105670 Score = 300 bits (332), Expect = 1e-76 Identities = 1217/1892 (64%), Gaps = 79/1892 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||| || ||||||| ||| |||| |||| | || | ||| || |||||||| || Sbjct 2955 ATCTACAGTGAACTTGATGGCATCGACAGCAGGACGTGTACGAAGGTAATACATGCCTGT 3014 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 ||| | || |||| |||| || ||||| | | || || | || || || Sbjct 3015 CTTTAATCCCTTTTGCCAGCCATAAAAGTGCATACTGGTGAGCTTACCAAAGTTGGGTTC 3074 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 |||| | || ||||| ||||| || || || || ||||||||| |||||||| Sbjct 3075 AGCCATAAAGATGTTCAAACTTTGACTTTGGTCAATATACGCACCACGATCAGCAGCCAT 3134 Query 65257 GTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAAT 65316 |||||||||| |||| || || |||||||| |||||||| || | | |||| Sbjct 3135 GTCAATGATAGTACGTTGAGAGATTTCCCAGACAGTCTTGTAGAGAT--CTT---TCAAG 3189 Query 65317 T------GGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCA--ATAATGCGATT 65367 | ||| || || || ||| | || || | | | || || ||| || Sbjct 3190 TTTTGAGGGATGCTGGGCAC-GTTCTGAATAGACCCTCCGTCAGCCATGATCATGTTCTT 3248 Query 65368 ACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTG----AACCAAGTGACGAT 65423 | |||| | | ||| | ||||| ||||| |||| | ||||||| | | Sbjct 3249 -CACATCATCGTT--CCAGAGACCCATATCGACCAGATCACGGAGTAACCAAGGG----T 3301 Query 65424 TGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTT 65483 ||| | |||| | || || || || ||||||||| |||| |||||| ||| |||| Sbjct 3302 TGACCATTTGGTATTCACCTGAGAGCACACGACGGGTGTAGAAGTTGGATGTGTAAGGTT 3361 Query 65484 CAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCA 65543 |||| ||||| || || || ||||| | ||| || ||||| ||||| ||||| |||| Sbjct 3362 CAAAACATTCATTGAAACCGAGCATTTGAGAAGTGGAGGCAGTAGGCATAGGAGCAACCA 3421 Query 65544 ACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACA 65603 || ||||| || | || | | | |||| || | | | || |||||| ||| | Sbjct 3422 GCAGAGAGTTGCGGACACCATGCTTAGCAATCTTTTCCTTGAGTGCGGCCCAGTCCCAGA 3481 Query 65604 TCGGTTTATCGTCG--ACATCCACGGGCCACATATCCTGTTGCAGGGTTCC----GATAC 65657 |||| | | | |||| | ||||| || | ||||||| | || || || Sbjct 3482 --GGTTGGTAGGTGTGACATTC------CACATGTCATATTGCAGGATACCCTTGGACAC 3533 Query 65658 TGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGG 65717 || | | | ||| | ||||| ||| | || | || | | ||| || Sbjct 3534 AGGGCTGCCTTCATAGG----TTTCGTAAGGTCCATACTTTTCAGCCAACTCGCAGGAGG 3589 Query 65718 TCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCT--C 65775 || || || ||| || ||||| || || || | || | ||||| ||| | | Sbjct 3590 CTTCCAGGGCAGCATGGTAGATGGTTTCAAAGAT---TTGAAT--GTTCAACTGCTTGGC 3644 Query 65776 ATC-GCTC--TCGTACGGCATACCCATCAGG-ACAAAAGTGTCGGCCAGACCTTGAACTC 65831 || | | ||| | || ||| | | || | ||||||||||| | |||||||| | Sbjct 3645 TTCAGGTGAATCGAATGG-ATAACGAAGAGCCATGAAAGTGTCGGCTAAGCCTTGAACAC 3703 Query 65832 CAATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGT-ACAGGGTAGTAA 65890 | | ||| || || | || | | ||||| | | ||| || | | ||||| |||||| Sbjct 3704 CTAAACCAATCGGTCTGTGTCTCTTGTTGGATCTT-TCGGCTTCGATGACAGGATAGTAA 3762 Query 65891 TTGATATCGATAATGCGATTCAAATTGCGTGTCACCACAT--GCACGATACGTCGCAATT 65948 ||||||||||| || ||||| || | || | || | | | || ||| ||| || Sbjct 3763 TTGATATCGATGATCTTGTTCAAGTTTCTAGTGATAACCTTGGTAACAT-CGT-GCAGTT 3820 Query 65949 GTTCGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGG 66008 || ||||||| | | || | || | | |||| | | || || | Sbjct 3821 TTTGGAAATCATACTTTTCT---CTATTG------------ATCACATAGGTAGGCAGAG 3865 Query 66009 CAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGG 66068 ||| || || | ||| |||||||| | || |||||| | || || |||||||| | Sbjct 3866 CAATGGAGGCCAAGTTACAGACAGCGACTTCATCAGGACTCGAGTATTCAACAATTTCTG 3925 Query 66069 TGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATG 66128 | |||||||| ||||| || || ||||| || || ||||||||||| | || || | Sbjct 3926 TACACAGATTGCTGCACTTGATCGTACCCAAGTTTTGCTGATTACTCTTTCTGTTACAAG 3985 Query 66129 CATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCC 66188 ||||||| || | ||| | ||| |||| ||||| ||| | || | ||||| | || Sbjct 3986 CATCCTTATAGAGTATGAATGGATTGCCTGTCTCCGTTTGAGCTTCCAAAATGGCATACC 4045 Query 66189 AAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGA 66248 | || | ||||| | ||| | || || |||| |||||||| | ||| |||| Sbjct 4046 ACAGCTTTTGAGCCTTGATCGTTTCTCTAGCTCTTCCTTCACGTTCGTATTTTTCATAGA 4105 Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308 | | || |||||||| | ||| | | ||| || | ||||| | || Sbjct 4106 GAGCAACAAACTCGTCACCCCAGATTTCATGTAATCCAGGAGCCTCATTGGGACAAAACA 4165 Query 66309 GCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 | |||||||||||| | | | ||||| |||| || |||||||| |||||||| || | Sbjct 4166 GAGACCAATCACCACCGTCTCTGACACGCTGCATGAAAAGATCAGGAATCCAGAGAGCAT 4225 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428 |||| ||||| || || | || || |||| ||||| |||||||| | || Sbjct 4226 AGAACAGATCACGAGCCCTGATTTCGTCTTTGCCAAAGTTTTTTCGCAAGTCTAAAAAGG 4285 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 ||| ||||| |||||||| ||||||| ||| || ||||| | |||| ||| || | Sbjct 4286 TAAAAATGTCTGCATGCCAAGGTTCCAAGTACATTGCGAATGCGCCCGGACGCTTATTAC 4345 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 ||||||| ||||| || ||||| ||||||||| ||||| | ||| || | | |||| Sbjct 4346 CACCTTGATCGACATAACGAGCCGTATTGTTGAAAACACGTAGCATGGGCAACAATCCGT 4405 Query 66549 TAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCA 66608 | || | || ||||||||| | ||| ||||| | || || || | ||||| || | Sbjct 4406 TGGAGTAACCGTTGGTGCCGGCAATGTATGATCCACTAGCACGAATGTTGTGAATGTTTA 4465 Query 66609 GACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGC 66668 |||||||| || || ||||| ||||| |||||| | ||| | || | Sbjct 4466 AGCCAATACCGCCTGCTGTCTTGGAGATTTGAGCACAGATTTTGAGCGTCTCATAGATAC 4525 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728 | || || || || | || ||||| || | | |||| ||| | ||||| |||| Sbjct 4526 CTTCGATCGAATCTTCTTTCATGGTGAGCAAGAAGCAAGAAGACATCTGGGGACGAGGTG 4585 Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTA-ATGGCGAGACATGTAATTG 66787 || | || || || || || ||||||| |||||||| | || ||||| | ||| Sbjct 4586 TGCCTGCATTAAATAGAGTAGGACTAGCGTGTGTAAAGTATCTTTCG-GACATCAAGTTG 4644 Query 66788 TACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGG 66847 || ||||| || | |||||||| | ||||| || |||| ||| ||||| | Sbjct 4645 TATGTCTCAATAGCTGCATCAATATCGGTTCCATGGATACCGATCGCAACACGCATGATC 4704 Query 66848 AGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGG 66907 | | ||||| |||||| | | | | | || | | | ||| || || || || Sbjct 4705 AAATGCTGAGGACGTTCGGCAATCTTGCCGTCAATCTTGAGAAGGTAAGAACGCTCGAGA 4764 Query 66908 GTCTTGATACCAAAGTACGAGTAATTGAAATC 66939 || |||| ||||||| | ||| |||||||| Sbjct 4765 GTTTTGAAACCAAAGAAGTTGTACTTGAAATC 4796 >seq106 Length=79482 Score = 212 bits (234), Expect = 5e-50 Identities = 568/854 (67%), Gaps = 21/854 (2%) Strand=Plus/Minus Query 61099 TACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATG 61158 || ||||| || ||||||||||| ||||| | || || |||||||| ||| || | Sbjct 37933 TATAAAAAAGCTGAAGCTTCCTTTTGGACAGCTGAAGAAATCGATTTGAGCAAGGATCTT 37874 Query 61159 AATGACTGGGAGCGTTTATCGAGCGGTGAACAACATTTCATTAAA---CATGTGTTGGCG 61215 |||| ||||| | || || | ||| |||| ||| | ||| ||||| Sbjct 37873 CATGATTGGGAAAACAAAATGACCGAAAATGAACGTTTCTTTATCTCTCGTGTCTTGGCC 37814 Query 61216 TTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTA-TTGGAACGTTTCGCGCAGGA 61274 |||||||| | ||| || || || || ||||| || || || || ||| | | | || Sbjct 37813 TTCTTTGCTGGTTCAGATGGCATTGTTAATGAAAACTTGGTTCAAAACTTTTGTG-ATGA 37755 Query 61275 GGTGCAAGTGTCG-GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCC 61333 || |||| || || || |||||||| ||||| || || || || || | | Sbjct 37754 AGT-CAAGATTCCTGAAGCTAAATGTTTCTATGGCTTTCAAATCATGATTGAAAACATTC 37696 Query 61334 ACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAG---CGGGCGGAACGTG 61390 || | || | |||||| || | || || || || |||| || | | | || | Sbjct 37695 ACGCAGAAACTTACAGTCTTTTGATTGACACTTATATCAAAGATAACCAAGAGAAA---G 37639 Query 61391 AACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCT 61450 || | || ||| || || || || || | ||| | || || |||||||||| Sbjct 37638 AAATGCTCTTTTCTGCTATTGACACTATCCCTTGTATCAAGAGAAAGGCTGATTGGGCCT 37579 Query 61451 TCAATTGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGG 61510 |||| ||||| || | ||||| | | |||| ||| || | | || ||||| | | Sbjct 37578 TCAAGTGGATTTCC--TCAAACGGTTCC-TTTGCTGAGCGCCTTGTTGCCTTTGCTGCTG 37522 Query 61511 TCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGAC 61570 |||| ||| | || ||| ||| || ||||| | ||||||||| | ||||||||||| Sbjct 37521 TCGAAGGTATCTTCTTCTCTGGTTCCTTTGCTTCCATCTTTTGGCTCAAGAAACGTGGTT 37462 Query 61571 TTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTG 61630 | ||||||||| |||| ||||||||||| ||||| | || || || || | ||| || Sbjct 37461 TGATGCCCGGTTTGACATTCAGCAATGAATTGATCTGTCGTGATGAAGGTCTTCATACTG 37402 Query 61631 ATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 | |||||| | | |||| | | | || || || ||||| | || || || Sbjct 37401 ACTTTGCTTGTCTTTTATTTACCCACCTTC--GT-AAGCGTCCTAGCCAAGAACGCGTCA 37345 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCG 61750 || || | || || || | || ||||| |||||| |||| || ||| | |||| Sbjct 37344 AGGATATCATCTTGGAAGCTGTCAGCATTGAACAAGAATTTTTGACGGATGCTCTTCCCG 37285 Query 61751 TCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACC 61810 | | ||||| |||||||||| || | |||| || || |||||||| ||||| || | Sbjct 37284 TTGCTCTCATTGGCATGAATTCTGCCTTGATGTGTCAATACATTGAATTCGTTGCTGATC 37225 Query 61811 GTCTGTTGGTCGAT-TTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTC 61869 |||| |||| | | |||||| || | || || | | | || |||||||| || Sbjct 37224 GTCTCATGGTTGCTCTTGGGTTCGACAAG-ATTTACATGGCTACTAATCCATTTGACTTT 37166 Query 61870 ATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929 ||||||||||| || || | |||||||| || || || || || ||||| ||| ||| Sbjct 37165 ATGGACATGATCTCTCTCCAAGGCAAGACCAACTTCTTTGAAAAGCGTGTCTCCGATTAT 37106 Query 61930 CAACGTTTGGGTGT 61943 |||||| ||||| Sbjct 37105 CAACGTGCTGGTGT 37092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397565286598400