Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20microsporus_20var._20microsporus_20[genbank_20GCA_5F00208 3745.1_202017-04-12] 560 sequences; 24,950,816 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq215 98.7 3e-16 seq102 84.2 7e-12 >seq215 Length=31895 Score = 98.7 bits (108), Expect = 3e-16 Identities = 115/152 (76%), Gaps = 4/152 (3%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACT 2832 || || |||||||| ||||| ||||||||| | |||||||||||| ||| |||| | Sbjct 14034 GTCTCCCACCGTTCTGGTGAGACTGAAGATACCACAATCGCTGATCTTGTCGTTGGTCTT 14093 Query 2833 AACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATACA 2890 |||||||||| ||||| ||| || ||| || | | ||| ||| | ||||| | Sbjct 14094 CGTACTGGTCAAATCAAGACTGGTGCTCCTTG-CA-GAAGTGAGCGTTTAGCTAAGCTTA 14151 Query 2891 ACCAATTGCTTCGTATCGAAGACCAACTTGGT 2922 |||||||||||||||| ||||| ||| | ||| Sbjct 14152 ACCAATTGCTTCGTATTGAAGAACAATTGGGT 14183 >seq102 Length=81779 Score = 84.2 bits (92), Expect = 7e-12 Identities = 115/157 (73%), Gaps = 8/157 (5%) Strand=Plus/Plus Query 2773 GTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTG--CAA 2830 || || ||| | || ||||||||||||||| | || || |||||| ||| || | | Sbjct 27368 GTCTCTCACAGATCTGGTGAAACTGAAGATACTACCATTGCTGATCTTGTCGTCGGTCTC 27427 Query 2831 CTAACGCTGGTCAAATTAAGACAGGT--TCATTGTCACGTACTGACCGTATTGCTAAATA 2888 | | |||||||||| ||||| ||| || ||| ||| |||| ||| |||| || || Sbjct 27428 CGTA--CTGGTCAAATCAAGACTGGTGCTCCTTG--CCGTTCTGAACGTCTTGCCAAGTA 27483 Query 2889 CAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAA 2925 ||||||| | || ||||| ||||| || | |||||| Sbjct 27484 CAACCAACTTCTCCGTATTGAAGAAGAATTGGGTGAA 27520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156037362344640