Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq290 304 2e-80 seq1318 298 8e-79 seq564 295 1e-77 seq472 289 4e-76 seq1307 282 6e-74 seq470 266 5e-69 seq1258 257 3e-66 seq480 158 2e-36 seq339 78.8 1e-12 >seq290 Length=642 Score = 304 bits (336), Expect = 2e-80 Identities = 207/229 (90%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 245 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 188 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||||||| ||||||| | || Sbjct 187 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGATGAAGTTTCAAAAGTTT 128 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| ||| ||||| ||| | ||||||||||||||||||||| Sbjct 127 ACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGCG 68 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 67 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 19 >seq1318 Length=744 Score = 298 bits (330), Expect = 8e-79 Identities = 206/229 (90%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||| | ||||||| |||| ||||||| |||||||||||||||| | Sbjct 367 GTACAAAGGGCAGGGACGAAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 424 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||||||| ||||||| | || Sbjct 425 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGATGAAGTTTCAAAAGTTT 484 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| ||| ||||| ||| | ||||||||||||||||||||| Sbjct 485 ACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGCG 544 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 545 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 593 >seq564 Length=793 Score = 295 bits (326), Expect = 1e-77 Identities = 205/229 (90%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| | ||||| |||| ||||||| |||||||||||||||| | Sbjct 113 GTACAAAGGGCAGGGACGTAATAAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 170 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 || |||||||| ||| |||| ||||| |||||||||| ||||||||| ||||||| | || Sbjct 171 CTTGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGATGAAGTTTCAAAAGTTT 230 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| ||| ||||| ||| | ||||||||||||||||||||| Sbjct 231 ACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGCG 290 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 291 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 339 >seq472 Length=649 Score = 289 bits (320), Expect = 4e-76 Identities = 204/229 (89%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| ||||||| |||||||| | Sbjct 140 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTAATAGGAATT-C 197 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||||||| ||||||| | || Sbjct 198 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGATGAAGTTTCAAAAGTTT 257 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| ||||||||| ||| ||||| ||| | ||||||||||||||||||||| Sbjct 258 ACCCAGACCTTCCGGCCAAGGATATAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGCG 317 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 318 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTTCCTAAAACTTCC 366 >seq1307 Length=742 Score = 282 bits (312), Expect = 6e-74 Identities = 195/217 (90%), Gaps = 3/217 (1%) Strand=Plus/Plus Query 13 GGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGAC 72 |||||||| ||||||| |||| ||||||| |||||||||||||||| |||||||||||| Sbjct 1 GGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-CCTCGTTGAAGAG 58 Query 73 CAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATTACCCGGACCTGT 131 ||| |||| ||||| |||||||||| ||||||||| ||||||| | |||||| ||||| Sbjct 59 CAATAATTACAATGCTCTATCCCCAGCACGATGAAGTTTCAAAAGTTTACCCAGACCTTC 118 Query 132 CGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATC 191 |||||||||| ||| ||||| ||| | ||||||||||||||||||||||||||||||||| Sbjct 119 CGGCCAAGGTTATAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATC 178 Query 192 TAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||| |||||||| Sbjct 179 TAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 215 >seq470 Length=463 Score = 266 bits (294), Expect = 5e-69 Identities = 186/208 (89%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| | |||||||||||||| | Sbjct 206 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGAGCTTACTAGGAATT-C 149 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 ||||||||||| ||| |||| ||||| |||||||||| ||||||||| ||||||| | || Sbjct 148 CTCGTTGAAGAGCAATAATTACAATGCTCTATCCCCAGCACGATGAAGTTTCAAAAGTTT 89 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| ||||| |||||||||| ||| ||||| ||| | ||||||||||||||||||||| Sbjct 88 ACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGCG 29 Query 180 GCCCAGAACATCTAAGGGCATCACAGAC 207 |||||||||||||||||||||||||||| Sbjct 28 GCCCAGAACATCTAAGGGCATCACAGAC 1 >seq1258 Length=873 Score = 257 bits (284), Expect = 3e-66 Identities = 175/194 (90%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 36 ATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCC 95 |||||| |||||||||||||||| |||||||||||| ||| |||| ||||| |||||||| Sbjct 1 ATGACTTGCGCTTACTAGGAATT-CCTCGTTGAAGAGCAATAATTACAATGCTCTATCCC 59 Query 96 CATCACGATGAAATTTCAAA-GATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTG 154 || ||||||||| ||||||| | |||||| ||||| |||||||||| ||| ||||| || Sbjct 60 CAGCACGATGAAGTTTCAAAAGTTTACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTG 119 Query 155 AATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 214 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 ACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTAT 179 Query 215 TGCCTCAAACTTCC 228 ||||| |||||||| Sbjct 180 TGCCTAAAACTTCC 193 >seq480 Length=775 Score = 158 bits (174), Expect = 2e-36 Identities = 101/110 (92%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| ||||| |||||||||| ||| ||||| ||| | |||||||||||||||||||| Sbjct 775 TACCCAGACCTTCCGGCCAAGGTTATAAACTCGCTGACTTCATCAGTGTAGCGCGCGTGC 716 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 715 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 666 >seq339 Length=702 Score = 78.8 bits (86), Expect = 1e-12 Identities = 45/46 (98%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 183 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 CAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTAAAACTTCC 46 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751966736690