Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq1776 125 4e-27 seq1307 125 4e-27 seq1258 125 4e-27 seq339 125 4e-27 seq294 125 4e-27 seq564 120 2e-25 seq560 120 2e-25 seq480 120 2e-25 seq337 120 2e-25 >seq1776 Length=980 Score = 125 bits (138), Expect = 4e-27 Identities = 100/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| |||||||||| ||| | ||| ||||| Sbjct 286 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGAGCGAGTCATAATAA--ACA-CGCCC 341 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 342 AATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 398 >seq1307 Length=742 Score = 125 bits (138), Expect = 4e-27 Identities = 100/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| |||||||||| ||| | ||| ||||| Sbjct 538 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGAGCGAGTCATAATAA--ACA-CGCCC 593 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 594 AATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 650 >seq1258 Length=873 Score = 125 bits (138), Expect = 4e-27 Identities = 100/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| |||||||||| ||| | ||| ||||| Sbjct 516 GAACCCAAAAACTTTTCTTTCGC-TAAGATGCTGAGCGAGTCATAATAA--ACA-CGCCC 571 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 572 AATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 628 >seq339 Length=702 Score = 125 bits (138), Expect = 4e-27 Identities = 100/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| |||||||||| ||| | ||| ||||| Sbjct 369 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGAGCGAGTCATAATAA--ACA-CGCCC 424 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 425 AATCGCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 481 >seq294 Length=696 Score = 125 bits (138), Expect = 4e-27 Identities = 100/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| |||||||||| ||| | ||| ||||| Sbjct 350 GAACCCAAAAACTTTACTTTCGC-TAAGATGCAGAGCGAGTCATAATAA--ACA-CGCCC 295 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 294 AATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 238 >seq564 Length=793 Score = 120 bits (132), Expect = 2e-25 Identities = 99/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| || ||||||| ||| | ||| ||||| Sbjct 662 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGACCGAGTCATAATAA--ACA-CGCCC 717 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 718 AATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 774 >seq560 Length=556 Score = 120 bits (132), Expect = 2e-25 Identities = 99/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| |||||||||| ||| | ||| ||||| Sbjct 160 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGAGCGAGTCATAATAA--ACA-CGCCC 215 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||| ||||| |||||||||||||||||||||| ||||||||||| Sbjct 216 AATCTCTAGTCGGCAGAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 272 >seq480 Length=775 Score = 120 bits (132), Expect = 2e-25 Identities = 99/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| ||| |||||| ||| | ||| ||||| Sbjct 343 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGAGTGAGTCATAATAA--ACA-CGCCC 288 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 287 AATCTCTAGTCGGCATAGTTTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 231 >seq337 Length=760 Score = 120 bits (132), Expect = 2e-25 Identities = 99/117 (85%), Gaps = 4/117 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| ||||| |||| | |||| ||| |||||||||| ||| | ||| ||||| Sbjct 337 GAACCCAAAAACTTTACTTTCGC-TAAGATGCTGAGCGAGTCATAATAA--ACA-CGCCC 392 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| ||||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 393 AATCTCTAGTCGGCATAGATTGTGGTTAAGACTACGACGGTATCTAATCGTCTTCGA 449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278388082740