Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq290 95.1 7e-18 seq564 93.3 3e-17 seq472 93.3 3e-17 seq470 93.3 3e-17 seq1318 89.7 3e-16 >seq290 Length=642 Score = 95.1 bits (104), Expect = 7e-18 Identities = 68/76 (89%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||||| || |||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 286 CTCACTATACCCATTCAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 228 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 227 TAAT-CAACGCAAGCT 213 >seq564 Length=793 Score = 93.3 bits (102), Expect = 3e-17 Identities = 70/77 (91%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 49 CTCACTA-AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||| | ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 72 CTCACTATAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 129 Query 108 GTAATACAACGCAAGCT 124 |||||| |||||||||| Sbjct 130 GTAATA-AACGCAAGCT 145 >seq472 Length=649 Score = 93.3 bits (102), Expect = 3e-17 Identities = 70/77 (91%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 49 CTCACTA-AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||| | ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 99 CTCACTATAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 156 Query 108 GTAATACAACGCAAGCT 124 ||||| ||||||||||| Sbjct 157 GTAAT-CAACGCAAGCT 172 >seq470 Length=463 Score = 93.3 bits (102), Expect = 3e-17 Identities = 70/77 (91%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 49 CTCACTA-AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||| | ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 247 CTCACTATAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 190 Query 108 GTAATACAACGCAAGCT 124 ||||| ||||||||||| Sbjct 189 GTAAT-CAACGCAAGCT 174 >seq1318 Length=744 Score = 89.7 bits (98), Expect = 3e-16 Identities = 69/77 (90%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 49 CTCACTA-AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGAC 107 ||||||| | ||||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 326 CTCACTATAACCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGAC 383 Query 108 GTAATACAACGCAAGCT 124 | ||| ||||||||||| Sbjct 384 GAAAT-CAACGCAAGCT 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300787123880