Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq337 84.2 2e-14 seq461 82.4 8e-14 seq560 78.8 1e-12 seq396 78.8 1e-12 seq342 78.8 1e-12 seq1776 75.2 1e-11 seq1258 75.2 1e-11 seq667 75.2 1e-11 >seq337 Length=760 Score = 84.2 bits (92), Expect = 2e-14 Identities = 131/183 (72%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 65 |||| ||||| ||| |||| |||| ||| ||||||||| ||| ||| |||| ||| Sbjct 701 GGACAATTACTATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 642 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGT 124 ||||||||||| |||| ||| | | | ||||||| || ||||| ||| | | || Sbjct 641 GCATGGAATAATGAAATATGACTTTAG-TCCTATTTTCGTTGGTTT--AGGTACTTCAGT 585 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| | || |||| | ||||| | | | ||||||||||||||| Sbjct 584 AATGATGAATAGAAACGGTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGG 525 Query 185 ATT 187 ||| Sbjct 524 ATT 522 >seq461 Length=563 Score = 82.4 bits (90), Expect = 8e-14 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 65 |||| |||| ||| |||| |||| ||| ||||||||| ||| ||| |||| ||| Sbjct 179 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 120 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGT 124 ||||||||||| |||| ||| | | | ||||||| || ||||| ||| || | || Sbjct 119 GCATGGAATAATGAAATATGACTTTAG-TCCTATTTTCGTTGGTTT--AGGTCCTTCAGT 63 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| | || |||| | ||||| | | | ||||||||||||||| Sbjct 62 AATGATGAATAGAAACGGTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGG 3 Query 185 AT 186 || Sbjct 2 AT 1 >seq560 Length=556 Score = 78.8 bits (86), Expect = 1e-12 Identities = 130/183 (71%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 65 |||| |||| ||| |||| |||| ||| ||||||||| ||| ||| |||| ||| Sbjct 524 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 465 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGT 124 ||||||||||| |||| ||| | | | ||||||| || ||||| ||| | | || Sbjct 464 GCATGGAATAATGAAATATGACTTTAG-TCCTATTTTCGTTGGTTT--AGGTACTTCAGT 408 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| | || |||| | ||||| | | | ||||||||||||||| Sbjct 407 AATGATGAATAGAAACGGTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGG 348 Query 185 ATT 187 ||| Sbjct 347 ATT 345 >seq396 Length=765 Score = 78.8 bits (86), Expect = 1e-12 Identities = 130/183 (71%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 65 |||| |||| ||| |||| |||| ||| ||||||||| ||| ||| |||| ||| Sbjct 540 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 599 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGT 124 ||||||||||| |||| ||| | | | ||||||| || ||||| ||| | | || Sbjct 600 GCATGGAATAATGAAATATGACTTTAG-TCCTATTTTCGTTGGTTT--AGGTACTTCAGT 656 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| | || |||| | ||||| | | | ||||||||||||||| Sbjct 657 AATGATGAATAGAAACGGTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGG 716 Query 185 ATT 187 ||| Sbjct 717 ATT 719 >seq342 Length=609 Score = 78.8 bits (86), Expect = 1e-12 Identities = 130/183 (71%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 65 |||| |||| ||| |||| |||| ||| ||||||||| ||| ||| |||| ||| Sbjct 202 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 143 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGT 124 ||||||||||| |||| ||| | | | ||||||| || ||||| ||| | | || Sbjct 142 GCATGGAATAATGAAATATGACTTTAG-TCCTATTTTCGTTGGTTT--AGGTACTTCAGT 86 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| | || |||| | ||||| | | | ||||||||||||||| Sbjct 85 AATGATGAATAGAAACGGTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGG 26 Query 185 ATT 187 ||| Sbjct 25 ATT 23 >seq1776 Length=980 Score = 75.2 bits (82), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 65 |||| |||| ||| |||| |||| ||| ||||||||| ||| ||| |||| ||| Sbjct 650 GGACAATTACCATGAGCAAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 591 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGT 124 ||||||||||| |||| ||| | | | |||||| || ||||| ||| | | || Sbjct 590 GCATGGAATAATGAAATATGACTTTAG-TCATATTTTCGTTGGTTT--AGGTACTTCAGT 534 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| | || |||| | ||||| | | | ||||||||||||||| Sbjct 533 AATGATGAATAGAAACGGTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGG 474 Query 185 ATT 187 ||| Sbjct 473 ATT 471 >seq1258 Length=873 Score = 75.2 bits (82), Expect = 1e-11 Identities = 119/166 (72%), Gaps = 6/166 (4%) Strand=Plus/Minus Query 25 AAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTACCATGGAATAATAGAAT 82 |||| |||| ||| ||||||||| ||| ||| |||| ||| ||||||||||| ||| Sbjct 863 AAATCAGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTAGCATGGAATAATGAAAT 804 Query 83 AGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATA 141 | ||| | | | ||||||| || ||||| ||| | | |||||||| |||| | Sbjct 803 ATGACTTTAG-TCCTATTTTCGTTGGTTT--AGGTACTTCAGTAATGATGAATAGAAACG 747 Query 142 GTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 || |||| | ||||| | | | |||||||||||||||||| Sbjct 746 GTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGGATT 701 >seq667 Length=655 Score = 75.2 bits (82), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 8 GGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT--GCTCGAATACATTA 65 |||| |||| ||| |||| ||| ||| ||||||||| ||| ||| |||| ||| Sbjct 391 GGACAATTACCATGAGCAAATCCGAGTGTTTAAAGCAGGCTTTTAAGCTTGAATGTGTTA 450 Query 66 CCATGGAATAATAGAATAGGACGTGCGGTTCTATTTT-GTAGGTTTCTAGGACCGCCCGT 124 ||||||||||| |||| ||| | | | ||||||| || ||||| ||| | | || Sbjct 451 GCATGGAATAATGAAATATGACTTTAG-TCCTATTTTCGTTGGTTT--AGGTACTTCAGT 507 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| |||| | || |||| | ||||| | | | ||||||||||||||| Sbjct 508 AATGATGAATAGAAACGGTTAGGGGCATTTGTATTTGGTCGCTAGAGGTGAAATTCTTGG 567 Query 185 ATT 187 ||| Sbjct 568 ATT 570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511977352640