Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1318 358 1e-96 seq564 349 7e-94 seq472 349 7e-94 seq1307 342 1e-91 seq290 338 1e-90 seq1258 311 2e-82 seq470 280 3e-73 seq480 206 5e-51 seq339 123 5e-26 seq294 84.2 4e-14 >seq1318 Length=744 Score = 358 bits (396), Expect = 1e-96 Identities = 236/260 (91%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 627 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTG 568 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| || || |||||| || Sbjct 567 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAGTTTAT 508 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||| Sbjct 507 AACCTTGGCCGGAAGGTCTGGGTAAACTTTTGAAACTTCATCGTGCTGGGGATAGAGCAT 448 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| Sbjct 447 TGTAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGA 388 Query 309 TTACGTCCCTGCCCTTTGTA 328 || ||||||||||||||||| Sbjct 387 TTTCGTCCCTGCCCTTTGTA 368 >seq564 Length=793 Score = 349 bits (386), Expect = 7e-94 Identities = 234/260 (90%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| | ||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 373 GGCTTCTTAGAGAGTCTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTG 314 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| || || |||||| || Sbjct 313 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAGTTTAT 254 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||| Sbjct 253 AACCTTGGCCGGAAGGTCTGGGTAAACTTTTGAAACTTCATCGTGCTGGGGATAGAGCAT 194 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || ||||||||||||||||| |||||| |||||||||||| ||||||||| ||||| | Sbjct 193 TGTAATTATTGCTCTTCAACAAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTTA 134 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 133 TTACGTCCCTGCCCTTTGTA 114 >seq472 Length=649 Score = 349 bits (386), Expect = 7e-94 Identities = 234/260 (90%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||||||||||| |||||||| |||||||| ||| ||||||||||||| Sbjct 400 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGAAATAACAGGTCTG 341 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| || || |||||| || Sbjct 340 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAGTTTAT 281 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 ||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||| Sbjct 280 ATCCTTGGCCGGAAGGTCTGGGTAAACTTTTGAAACTTCATCGTGCTGGGGATAGAGCAT 221 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||| Sbjct 220 TGTAATTATTGCTCTTCAACGAGGAATTCCTATTAAGCGCAAGTCATCAGCTTGCGTTGA 161 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 160 TTACGTCCCTGCCCTTTGTA 141 >seq1307 Length=742 Score = 342 bits (378), Expect = 1e-91 Identities = 226/249 (91%), Gaps = 1/249 (0%) Strand=Plus/Minus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 249 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTG 190 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| || || |||||| || Sbjct 189 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAGTTTAT 130 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||| Sbjct 129 AACCTTGGCCGGAAGGTCTGGGTAAACTTTTGAAACTTCATCGTGCTGGGGATAGAGCAT 70 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 || |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||| Sbjct 69 TGTAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGA 10 Query 309 TTACGTCCC 317 ||||||||| Sbjct 9 TTACGTCCC 1 >seq290 Length=642 Score = 338 bits (374), Expect = 1e-90 Identities = 222/244 (91%), Gaps = 1/244 (0%) Strand=Plus/Plus Query 86 TATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 144 |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 1 TATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTGTGATGCCCTTAGATGT 60 Query 145 TCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGG 204 |||||||||||||||||||||||||| || || |||||| || ||||||||||||||| Sbjct 61 TCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAGTTTATAACCTTGGCCGGAAGG 120 Query 205 TCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTT 264 ||||||||| ||| | ||||| |||||||||||||||||||||| ||||||||||||| Sbjct 121 TCTGGGTAAACTTTTGAAACTTCATCGTGCTGGGGATAGAGCATTGTAATTATTGCTCTT 180 Query 265 CAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTT 324 ||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 181 CAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTT 240 Query 325 TGTA 328 |||| Sbjct 241 TGTA 244 >seq1258 Length=873 Score = 311 bits (344), Expect = 2e-82 Identities = 206/227 (91%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 227 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTG 168 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| || || |||||| || Sbjct 167 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAGTTTAT 108 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||||||||||||||||||||| ||| | ||||| |||||||||||||||||||| Sbjct 107 AACCTTGGCCGGAAGGTCTGGGTAAACTTTTGAAACTTCATCGTGCTGGGGATAGAGCAT 48 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCAT 295 || |||||||||||||||||||||||| |||||||||||| ||||| Sbjct 47 TGTAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCAT 1 >seq470 Length=463 Score = 280 bits (310), Expect = 3e-73 Identities = 185/205 (90%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||| Sbjct 1 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAG 60 Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243 || || |||||||||||||||||||||||| ||| | ||||| ||||||||||||||| Sbjct 61 TTTATAACCTTGGCCGGAAGGTCTGGGTAAACTTTTGAAACTTCATCGTGCTGGGGATAG 120 Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGC 303 ||||||| |||||||||||||||||||||||| |||||||||| | ||||||||| || Sbjct 121 AGCATTGTAATTATTGCTCTTCAACGAGGAATTCCTAGTAAGCTCAAGTCATCAGCTTGC 180 Query 304 GTTGATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||||||| Sbjct 181 GTTGATTACGTCCCTGCCCTTTGTA 205 >seq480 Length=775 Score = 206 bits (228), Expect = 5e-51 Identities = 133/144 (92%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 632 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTG 691 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| || || |||||| || Sbjct 692 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGAAGTCAGCGAGTTTAT 751 Query 189 CACCTTGGCCGGAAGGTCTGGGTA 212 ||||||||||||||||||||||| Sbjct 752 AACCTTGGCCGGAAGGTCTGGGTA 775 >seq339 Length=702 Score = 123 bits (136), Expect = 5e-26 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 80 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTCTG 21 Query 129 TGATGCCCTTAGATGTTCTG 148 |||||||||||||||||||| Sbjct 20 TGATGCCCTTAGATGTTCTG 1 >seq294 Length=696 Score = 84.2 bits (92), Expect = 4e-14 Identities = 54/58 (93%), Gaps = 1/58 (2%) Strand=Plus/Plus Query 70 GGCTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTC 126 |||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct 639 GGCTTCTTAGAGAGACTATCGGCTTCAAGCCGAAGGAAGTTTTAGGCAATAACAGGTC 696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947156750848