Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhizopus_20oryzae_20[genbank_20GCA_5F000697195.1_202014-06-02] 4,566 sequences; 42,900,422 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq393 143 4e-32 seq1446 138 2e-30 seq1280 138 2e-30 seq445 138 2e-30 seq288 138 2e-30 seq1295 134 2e-29 seq1232 134 2e-29 seq648 104 4e-20 >seq393 Length=730 Score = 143 bits (158), Expect = 4e-32 Identities = 104/118 (88%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | ||||||| |||||||| |||||||||| ||| | || | Sbjct 240 GTACGAGAGGAACC-CTGCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 297 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct 298 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAATGCCTCTAAGTCAGAATCCATGC 355 >seq1446 Length=6578 Score = 138 bits (152), Expect = 2e-30 Identities = 103/118 (87%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| ||||||| || ||| | || | Sbjct 6455 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGTTGGTTGAAAGGCCAAT 6398 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 6397 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 6340 >seq1280 Length=660 Score = 138 bits (152), Expect = 2e-30 Identities = 103/118 (87%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 198 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 255 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct 256 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCATAATCCATGC 313 >seq445 Length=569 Score = 138 bits (152), Expect = 2e-30 Identities = 103/118 (87%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 421 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 364 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct 363 GCCGCGAAGCTACCTTCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 306 >seq288 Length=892 Score = 138 bits (152), Expect = 2e-30 Identities = 103/118 (87%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| ||||||| |||||||||| ||| | || | Sbjct 541 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGCATTTGCGGCTGGTTGAAAGGCCAAT 598 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 599 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGC 656 >seq1295 Length=741 Score = 134 bits (148), Expect = 2e-29 Identities = 99/113 (88%), Gaps = 2/113 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 631 GTACGAGAGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 688 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 689 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATC 741 >seq1232 Length=357 Score = 134 bits (148), Expect = 2e-29 Identities = 102/118 (86%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||| |||||| | ||||||| |||||||| |||||||||| ||| | || | Sbjct 173 GTACGAGCGGAACC-CTTCATTCAGA-TAATTGGTATTTGCGGCTGGTTGAAAGGCCAAT 230 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct 231 GCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGACAGAATCCATGC 288 >seq648 Length=784 Score = 104 bits (114), Expect = 4e-20 Identities = 60/62 (97%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 782 CAATGCCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCAT 723 Query 117 GC 118 || Sbjct 722 GC 721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819163764224