Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2269 275 9e-72 >seq2269 Length=1980 Score = 275 bits (304), Expect = 9e-72 Identities = 211/249 (85%), Gaps = 21/249 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 189 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 246 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| |||| |||||||||| ||||||||| ||||||||| ||||| |||||| Sbjct 247 CTCGTTCAAGTCCAAGAATTGCAATGGACTATCCCCAGCACGATGAAGTTTCACAAGATT 306 Query 120 ACCCGGACCTGTCGGCCAAG---GTG---------------ATAGACTCGTTGAATACAT 161 |||| | ||| ||||||||| ||| || ||||||||| | ||| Sbjct 307 ACCCAGGCCTTTCGGCCAAGGAAGTGGCATTTTTAAGGTGCCTATACTCGTTGACTTCAT 366 Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 426 Query 222 AACTTCCGT 230 ||||||||| Sbjct 427 AACTTCCGT 435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751955291955