Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq2269 241 2e-61 >seq2269 Length=1980 Score = 241 bits (266), Expect = 2e-61 Identities = 209/256 (82%), Gaps = 5/256 (2%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT---GCTCGAATAC 122 |||| |||||||| ||||||||||||||||||||||||||||| || || ||||| Sbjct 1160 CCAGAACTTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCATTATTCGCCTGAATAT 1101 Query 123 ATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCC 182 ||||||||||||||||| |||||||| | |||| |||||||||||||||| ||| Sbjct 1100 ATTAGCATGGAATAATAAAATAGGACTTT-GGTTTTATTTTGTTGGTTTCTGAAACCAAG 1042 Query 183 GTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242 ||||||||||||||||| ||| ||||| | |||| |||||||| |||||||| ||| Sbjct 1041 GTAATGATTAATAGGGACAGTTGGGGGCATTTGTATGGCATTGTCAGTGGTGAAATACTT 982 Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302 | | || |||| |||| ||||||||||| |||||||||||||||||||||| Sbjct 981 GAACCAATGCCAGACAAACTGATGCGAAAGCGTCTGCCAAGGATGTTTTCATTAATCA-A 923 Query 303 GAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 922 GAACGAAAGTTAGGGG 907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915143834176