Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2741 228 3e-57 >seq2741 Length=1504 Score = 228 bits (252), Expect = 3e-57 Identities = 247/324 (76%), Gaps = 25/324 (8%) Strand=Plus/Minus Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 ||||| ||||| || || || || ||||||||| |||||||||||||||||| |||| Sbjct 1329 GGATGTTGGCGAAAAGGCATCAATCGACCCGTCTTGAAACACGGACCAAGGAGTCCAACA 1270 Query 441 TCTATGCGAGTGTTTGGGT---GTCAAACCCGTGCGCGTAATGAAAGTGAAC-------- 489 | |||||||| |||||| | |||||| || |||||||||||||||| Sbjct 1269 TGCATGCGAGTATTTGGGAAAAGATAAACCCATGTGCGTAATGAAAGTGAATTTTATTTA 1210 Query 490 GGAGGTGGGAACCCG------TGAGGGTGCACCATCGACCGATCCT-GATGTCTTCGGAT 542 | | ||| ||| | || ||| ||| |||| ||||| | ||| | | | Sbjct 1209 GAATGTG---ACCTGCTTTATTGTGGG-GCAACATCAACCGACTTTAGATAGCGCTGCTT 1154 Query 543 GGAT---TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 | | |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 1153 GAAAAGGTTGAGTAAGAGCATGTATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 1094 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||| |||||||||||||| |||| ||||| || | ||||| ||||||||||||| Sbjct 1093 AGGGTGAAGTCAGAGGAAACTCTGATGGAAGCTCGTAGAGATTCTGACGTGCAAATCGAT 1034 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 | |||||||||||||||||||| Sbjct 1033 CTCAAAATTTGGGTATAGGGGCGA 1010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079868361350