Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq6112 96.9 9e-18 >seq6112 Length=86658 Score = 96.9 bits (106), Expect = 9e-18 Identities = 112/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 189 TGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT-GGCGAAG 247 ||||||| || ||||| |||||| | | |||| || |||||| || || ||| || Sbjct 72839 TGGAATTTCAAGTGTAAGGATGAAATCTGGACATATTTGAAGGAACTCCTATTGGCTAAT 72898 Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307 |||| || || || |||| ||| ||||||| |||||||||||| ||||||| Sbjct 72899 GCAGATTTCTTATATTTCATTGACATTCAGATACGAAAGTGTGGGGAGCAAATAGGATTA 72958 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||| |||||||| |||||||| || Sbjct 72959 GATACCCTTTTAGTCCACACCCTAAACTAT 72988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289520857248