Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2269 248 1e-63 >seq2269 Length=1980 Score = 248 bits (274), Expect = 1e-63 Identities = 236/310 (76%), Gaps = 55/310 (18%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| || || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 351 TACTCGTTGACTTCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 410 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAAT---AGTCCCTCTAAGAAGCC 117 ||||||||||||||||||||||| | | | | ||| | ||||||||||||||||| Sbjct 411 ACCTGTTATTGCCTCAAACTTCCGTCAGTT---AACCACTGACAGTCCCTCTAAGAAGCC 467 Query 118 -----------------------------AGCCACCAACCAT------------AGTCGA 136 | || || |||| || | Sbjct 468 TAAATAAGGGAAGCAGAATAAATCCCACAACCCTCCGCCCATTTAACCCCCGAAAGGATA 527 Query 137 T-------GGGGC-TATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 | | ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 528 TAAATAGCGTGGCATATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 587 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 588 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 647 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 648 TCAATCTGTC 657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796752628497