Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq267 170 6e-40 seq6112 82.4 2e-13 >seq267 Length=3367 Score = 170 bits (188), Expect = 6e-40 Identities = 187/256 (73%), Gaps = 36/256 (14%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 3112 CTTTTGTTCTACACGAGATTTCTGTTCTCGTTGAGCCCCCCTTAGGACACCTGCGTTATT 3171 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct 3172 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTTTACCAGGATC 3231 Query 127 GGC----------CCGCGAAGG-------------------------ACCTTAACGCCAG 151 || | ||| || |||||| |||| Sbjct 3232 AGCAGGCAAATAGCAGCGCTGGCCGAATAACCAACGCCGCCTAACCCGCCTTAATTCCAG 3291 Query 152 AA-AATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTA 210 || | | | |||||| | |||||| | | || | ||||||||||||| |||| |||| Sbjct 3292 AAGGGTAGGCCGTGAAGCCTAGTTCCTCATTATAAAATAAGTAAAAAAACAATAAAGGTA 3351 Query 211 GTGGTATTTCACTTGC 226 |||||||||||||||| Sbjct 3352 GTGGTATTTCACTTGC 3367 >seq6112 Length=86658 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 || ||| |||||||||| ||||||||||||||||| | | |||| ||||||||| || Sbjct 71230 TCATTATACCATTCATGCAGGTCACTAATTAGATGACAATGGATTTTGCTACCTTAGGAT 71171 Query 442 AGTCATAGTTACTCCCGCCGTTTAC 466 ||||||||| ||||||||||| Sbjct 71170 CCTCATAGTTAGGACCGCCGTTTAC 71146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635099647776