Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970855.1_202017-01-25] 6,137 sequences; 77,124,806 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2269 572 5e-161 >seq2269 Length=1980 Score = 572 bits (634), Expect = 5e-161 Identities = 451/536 (84%), Gaps = 38/536 (7%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAG-AGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||| ||||| |||||| |||| ||||||| || ||||||||||||||||| Sbjct 1418 GTACTCATTACAATTCCAAGACTAAAAAATAGCCCTGGATTGTTATTTATTGTCACTACC 1477 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 1478 TCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTAGCCGT 1537 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1538 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGT 1597 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC--- 236 || || |||| |||||||||| |||||||||||||||||||||||||| || ||||| Sbjct 1598 AGTCCTCTATACTACCATCGACAGTTGATAGGGCAGAAATTTGAATGATCCTTCGCCACC 1657 Query 237 -------GGCTCAAGGC----CATGCGATTCGTTAAGTTATTATGAATCACCAAGGA--- 282 | | || || ||||||| | | |||||||||||||||||||| | Sbjct 1658 CTGAGTTGCCCCAGAGCATAAAATGCGATATGCTTAGTTATTATGAATCACCAAGTAAGA 1717 Query 283 ----GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG 337 ||||| | |||||||| |||||||||||| | | |||||| |||||||| | Sbjct 1718 GGTTGCCCC------CATTGGTTTTGTATCTAATAAATGCCCTCCTTCCAGAAGTCGGAG 1771 Query 338 TTTTT---AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA---GGTAC 391 || || |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 1772 TTGTTTACAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAAAGGGTAT 1831 Query 392 TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC-TGTATAG--ATTG 448 |||||||||| ||| ||||| ||||||||||||||||||||||| ||||||| || | Sbjct 1832 CATCAAATAAATTATAGCTGATATAATGAGCCATTCGCAGTTTCACTTGTATAGAAATAG 1891 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1892 TTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510307306752