Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq43 275 9e-72 seq5819 159 5e-37 >seq43 Length=13242 Score = 275 bits (304), Expect = 9e-72 Identities = 211/249 (85%), Gaps = 21/249 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 6574 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 6631 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| |||| |||||||||| ||||||||| ||||||||| ||||| |||||| Sbjct 6632 CTCGTTCAAGTCCAAGAATTGCAATGGACTATCCCCAGCACGATGAAGTTTCACAAGATT 6691 Query 120 ACCCGGACCTGTCGGCCAAG---GTG---------------ATAGACTCGTTGAATACAT 161 |||| | ||| ||||||||| ||| || ||||||||| | ||| Sbjct 6692 ACCCAGGCCTTTCGGCCAAGGAAGTGGCATTTTTAAGGTGCCTATACTCGTTGACTTCAT 6751 Query 162 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6752 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 6811 Query 222 AACTTCCGT 230 ||||||||| Sbjct 6812 AACTTCCGT 6820 >seq5819 Length=1147 Score = 159 bits (176), Expect = 5e-37 Identities = 115/129 (89%), Gaps = 3/129 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 393 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 450 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| |||| |||||||||| ||||||||| ||||||||| ||||| |||||| Sbjct 451 CTCGTTCAAGTCCAAGAATTGCAATGGACTATCCCCAGCACGATGAAGTTTCACAAGATT 510 Query 120 ACCCGGACC 128 |||||| || Sbjct 511 ACCCGGCCC 519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751943548535