Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq5819 104 1e-20 seq43 104 1e-20 >seq5819 Length=1147 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 353 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 410 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 411 TAAT-CAACGCAAGCT 425 >seq43 Length=13242 Score = 104 bits (114), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 6534 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 6591 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 6592 TAAT-CAACGCAAGCT 6606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300778147820