Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq43 655 0.0 seq7749 82.4 2e-13 seq3783 78.8 3e-12 >seq43 Length=13242 Score = 655 bits (726), Expect = 0.0 Identities = 492/581 (85%), Gaps = 45/581 (8%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 761 CTTTTGTTCTACACGAGATTTCTGTTCTCGTTGAGCCCCCCTTAGGACACCTGCGTTATT 820 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||| Sbjct 821 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTTTACCAGGATC 880 Query 127 GGCCCGCGAAG-------------GA----------------------CCTTAACGCCAG 151 || || || || |||||| |||| Sbjct 881 AGCAAGCAAATAGCAACGCTGGCCGAATAACCAACGCCGCCTAACTCGCCTTAATTCCAG 940 Query 152 AAAA-TGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTA 210 || | | | | |||| | |||||| | | || | ||||||||||||| |||| |||| Sbjct 941 AAGGGTAGGCCGCGAAGCCTAGTTCCTCATTATAAAATAAGTAAAAAAACAATAAAGGTA 1000 Query 211 GTGGTATTTCACTTGCG-----CCGAAACGG--CTCCCACTTATTCTACA-CCTCTCAAG 262 ||||||||||||||||| ||||||| ||||||||||||||||| ||||| | | Sbjct 1001 GTGGTATTTCACTTGCGACTGGCCGAAACCAATCTCCCACTTATTCTACACCCTCT-ATG 1059 Query 263 TCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC 322 || |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1060 TCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCT 1119 Query 323 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1120 GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCT 1179 Query 383 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1180 CGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGA 1239 Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1240 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACATTGACATTCAG 1299 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1300 AGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 1340 >seq7749 Length=120745 Score = 82.4 bits (90), Expect = 2e-13 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 || ||| |||||||||| ||||||||||||||||| | | |||| ||||||||| || Sbjct 112119 TCATTATACCATTCATGCAGGTCACTAATTAGATGACAATGGATTTTGCTACCTTAGGAT 112060 Query 442 AGTCATAGTTACTCCCGCCGTTTAC 466 ||||||||| ||||||||||| Sbjct 112059 CCTCATAGTTAGGACCGCCGTTTAC 112035 >seq3783 Length=7021 Score = 78.8 bits (86), Expect = 3e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Plus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 6979 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 7021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635073288352