Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20culicis_20[genbank_20GCA_5F001970865.1_202017-01-25] 7,749 sequences; 71,049,901 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq43 569 6e-160 >seq43 Length=13242 Score = 569 bits (630), Expect = 6e-160 Identities = 450/536 (84%), Gaps = 38/536 (7%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAG-AGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||| ||||| |||||| |||| ||||||| || ||||||||||||||||| Sbjct 7805 GTACTCATTACAATTCCAAGACTAAAAAATAGCCCTGGATTGTTATTTATTGTCACTACC 7864 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 7865 TCCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGAAGTGGTAGCCGT 7924 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 7925 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTACCACCATGGT 7984 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC--- 236 || || |||| |||||||||| |||||||||||||||||||||||||| || ||||| Sbjct 7985 AGTCCTCTATACTACCATCGACAGTTGATAGGGCAGAAATTTGAATGATCCTTCGCCACC 8044 Query 237 -------GGCTCAAGGC----CATGCGATTCGTTAAGTTATTATGAATCACCAAGGA--- 282 | | || || ||||||| | | |||||||||||||||||||| | Sbjct 8045 CTGAGTTGCCCCAGAGCATAAAATGCGATATGCTTAGTTATTATGAATCACCAAGTAAGA 8104 Query 283 ----GCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG 337 ||||| | |||||||| |||||||||||| | | |||||| |||||||| | Sbjct 8105 GGTTGCCCC------CATTGGTTTTGTATCTAATAAATGCCCTCCTTCCAGAAGTCGGAG 8158 Query 338 TTTTT---AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAA---GGTAC 391 || || |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 8159 TTGTTTACAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAAGTAGTAAAAGGGTAT 8218 Query 392 TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCAC-TGTATAG--ATTG 448 |||||||||| ||| ||||| ||||||||||||||||||||||| ||||||| || | Sbjct 8219 CATCAAATAAATTATAGCTGATATAATGAGCCATTCGCAGTTTCACTTGTATAGAAATAG 8278 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8279 TTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 8334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510282959104