Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1007 273 3e-71 >seq1007 Length=8768 Score = 273 bits (302), Expect = 3e-71 Identities = 210/247 (85%), Gaps = 19/247 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||| ||| Sbjct 8566 GTACAAAGGGCAGGGACGTAATCAACGCAAGC-TGATGACTTGCGCTTACTAGGAA-TTC 8509 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| |||| |||||||||| ||||||||| ||||||||| ||||| |||||| Sbjct 8508 CTCGTTCAAGTCCAAGAATTGCAATGGACTATCCCCAGCACGATGAAGTTTCACAAGATT 8449 Query 120 ACCCGGACCTGTCGGCCAAGG---------------TG-ATAGACTCGTTGAATACATCA 163 |||| | ||| |||||||||| || | ||||||||| | ||||| Sbjct 8448 ACCCAGGCCTTTCGGCCAAGGAAAAGGGCATTTTACTGCCTGTACTCGTTGACTTCATCA 8389 Query 164 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8388 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 8329 Query 224 CTTCCGT 230 ||||||| Sbjct 8328 CTTCCGT 8322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751943198855