Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1007 217 3e-54 >seq1007 Length=8768 Score = 217 bits (240), Expect = 3e-54 Identities = 201/253 (79%), Gaps = 9/253 (4%) Strand=Plus/Plus Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCC-------TTTGCTCGAATACATT 125 |||||| ||||||||||||||||||||||||||||| || || ||||| ||| Sbjct 7567 TTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAGAATTATTTCGCCTGAATATATT 7626 Query 126 AGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTA 185 |||||||||||||| |||||||| | |||| |||||||||||||||| ||| ||| Sbjct 7627 AGCATGGAATAATAAAATAGGACTTT-GGTTTTATTTTGTTGGTTTCTGAAACCAAGGTA 7685 Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||||||||| ||| ||||| | |||| | |||||| |||||||| |||| | Sbjct 7686 ATGATTAATAGGGACAGTTGGGGGCATTTGTATGGCACTGTCAGTGGTGAAATACTTGAA 7745 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 | |||| |||| ||||||||||| |||||||||||||||||||||| ||| Sbjct 7746 CCAGTGCCAGACAAACTGATGCGAAAGCGTCTGCCAAGGATGTTTTCATTAATCA-AGAA 7804 Query 306 CGAAAGTTAGGGG 318 ||||||||||||| Sbjct 7805 CGAAAGTTAGGGG 7817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915128641856