Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq265 136 3e-27 >seq265 Length=13576 Score = 136 bits (150), Expect = 3e-27 Identities = 564/874 (65%), Gaps = 22/874 (3%) Strand=Plus/Plus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 ||||| ||||||| || ||| | || ||||||| ||||| |||||||| ||||| Sbjct 3119 TTCGTTCTGTTCCCAATAAAGTGGCACGAGATTTGGCAAATGTATAAAAAGGCCGAAGCC 3178 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176 ||||||||| || || || || ||||| || | |||| | ||||||| | | Sbjct 3179 AGCTTCTGGACTGTCGAAGAAGTTGATTTATCTCAGGACACCCAGCACTGGGAAAATAAA 3238 Query 61177 TCGAGCGGTGAACAACA----TTTCATTAA--ACATGTGTTGGCGTTCTTTGCCGCTTCG 61230 | | | | ||| | | ||| || || |||| | ||| | || || || || Sbjct 3239 -CTAACTGATAACGAAAGATTTTTTATCAAGAACAT-TCTTG-CATTTTTCGCAGCCAGT 3295 Query 61231 GACGGTATCGTCAATGAGAATTTA-TTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGA 61289 || || || ||||| || ||||| ||| | ||| | | | || | || | | || Sbjct 3296 GATGGAATAGTCAACGAAAATTTGGTTGCCAACTTTGGAACTGAAG-TCCAGATCCCTGA 3354 Query 61290 GGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAG 61349 ||| | |||||||| ||||||||||| || || || ||||| || |||||| Sbjct 3355 GGCTAGATGTTTCTATGGCTTCCAGATAATGATAGAAAACATCCACAGCGAAATGTACTC 3414 Query 61350 TGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCAT 61409 | | | || ||||| || |||| || | ||| | || | || || || | Sbjct 3415 TATGTTGATTGATACCTATATCAAAGATAATGAGGAGAGAGACTTCCTTTTTAACGCAGT 3474 Query 61410 CGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTAC 61469 || | || || | || ||| || ||||||| | | |||||| | || Sbjct 3475 CGCAAATATCCCATGTATCAAAAAGAAGGCTAATTGGGCACTGGAATGGATCG--ATGAC 3532 Query 61470 AACGGCTACATTT--GGTGAACGATTGCTGGCATT-TGCGGTGGTCGAGGGTGTATTTTT 61526 | || | | || || || ||||| || || |||| || | ||||| | || || Sbjct 3533 TCCAGCAAAAGTTTCGGAGAGAGATTGGCCGCCTTCTGCGTTGTT-GAGGGAATCTTCTT 3591 Query 61527 CAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGAC 61586 |||||| || ||||| || ||||||||| | ||||| ||||| ||||||||||| |||| Sbjct 3592 CAGTGGGTCTTTTGCTGCCATCTTTTGGCTCAAGAAGCGTGGTCTTATGCCCGGATTGAC 3651 Query 61587 CTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCT 61646 || || |||||||| | || |||||||| | || || |||| | ||| | Sbjct 3652 ATTTTCAAACGAGTTGATTTGCCGAGACGAGGGACTCCACACAGACTTTGGTTGCTTGTT 3711 Query 61647 ATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGA 61706 |||||| || || || || || |||| | | || || ||| Sbjct 3712 GTTCAAATGC---CTTGTTAACAAGCCCAGCCAGGAAACTATTCTATCCATCGTCACTGA 3768 Query 61707 GGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCAT 61766 || || || || || || ||| | || ||| | | ||| ||| || || || || Sbjct 3769 TGCTGTCGTGATTGAGCAAGAGTTTTTAACCGACTCCCTCCCCTGCTCTCTGATTGGTAT 3828 Query 61767 GAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTT 61826 ||| ||| || |||| || ||||| || || || ||||| ||| |||| ||| ||| Sbjct 3829 GAACAGTGTCCTGATGTGCCAATATATCGAGTTCGTAGCCGATCGTTTGTTAGTCTCTTT 3888 Query 61827 GGG-TATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGC 61885 ||| | ||| | || ||||| | | |||||||| || |||||||| |||||||| Sbjct 3889 GGGATTCGAAAAGCAT-TATAAGTCAATCAACCCATTCGACTTCATGGATATGATTTCCA 3947 Query 61886 TGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 || | || ||||| ||||| || ||||| || || Sbjct 3948 TGCAGGGTAAGACCAATTTCTTTGAGAAGCGCGT 3981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397530220728080