Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Smittium_20mucronatum_20[genbank_20GCA_5F001953115.1_202017-01-17] 7,797 sequences; 102,350,667 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq2800 84.2 8e-11 >seq2800 Length=6769 Score = 84.2 bits (92), Expect = 8e-11 Identities = 206/310 (66%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 12736 ATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAAT 12795 |||||| ||| || |||| || | | | || || | ||| |||| || | ||| || Sbjct 44 ATCGTACCAGATGACGCTCATACCCATAGATTCAGCAATGACGGAGAGTTGGGTACCGAT 103 Query 12796 GTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGA-AG 12854 || |||||||| | ||||| || || || || | | ||||||||| || || || Sbjct 104 GTGGCCATAACCGATGATACCAAGAGTTTTGCCACGGATTTCACGGCAGTTTTTGGAGAG 163 Query 12855 TCTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGAT 12914 | |||||||| | || || | ||| ||| | | ||| || | | |||||| | | Sbjct 164 T-TTGTTCCAGGTTCCCTGAGCCATTTCCTTGATACGATCACCGAGCATACGAGACAAAA 222 Query 12915 TAATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAA 12974 ||| | || | || ||||| || || || || | | |||||| ||||| || || | Sbjct 223 TAACAATTTCAGCAATCATGAGTTCAGCGACACTGCGACTGTTGCTGAAGGGGGAGTTGA 282 Query 12975 AGACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGA 13034 | || ||||| || | || ||| | ||| || || ||||| | || ||||||| Sbjct 283 AAACGGCAATACCGCGGGAGGCAGCAAAGTCGAGGTTGACCTGGTTAGTTCCGATGCAGA 342 Query 13035 AGCATCCTAT 13044 |||| || || Sbjct 343 AGCAACCAAT 352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884698101615721