Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq12 73.4 5e-11 >seq12 Length=4600585 Score = 73.4 bits (80), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 8/106 (8%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCAC--GTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||| || || |||||| | | | || |||||||||||||| ||| Sbjct 34657 CTAGAAACCAATAAC-TA---ACGCACTCGGCGTGTTTTATTATTCCATGCTTTAACATT 34602 Query 64 CGGGCGTAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| ||| |||||||||||||||||| |||| |||| |||||| Sbjct 34601 CAGGCATAAAAGCCTGCTTTGAACACTCTGATTTGCTCATGGTAAA 34556 Score = 73.4 bits (80), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 8/106 (8%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCAC--GTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||| || || |||||| | | | || |||||||||||||| ||| Sbjct 188656 CTAGAAACCAATAAC-TA---ACGCACTCGGCGTGTTGTATTATTCCATGCTTTAACATT 188601 Query 64 CGGGCGTAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| ||| |||||||||||||||||| |||| |||| |||||| Sbjct 188600 CAGGCATAAAAGCCTGCTTTGAACACTCTGATTTGCTCATGGTAAA 188555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595199717466