Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq43 652 0.0 seq34 652 0.0 seq33 652 0.0 seq8 652 0.0 seq12 477 3e-132 seq13 443 7e-122 seq36 403 6e-110 seq1 203 1e-49 >seq43 Length=2303 Score = 652 bits (722), Expect = 0.0 Identities = 472/540 (87%), Gaps = 7/540 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 725 CTTTTGCTCTACACGAGATTTCTGTTCTCGTTGAGCCCCCCTTAGGACACCTGCGTTATT 784 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||| ||||||||||| || || || Sbjct 785 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACTTGACAATGTCAATTACTTGGGTC 844 Query 127 GGCCCGC--GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 | || ||||| ||||| || |||| | | ||||| | | | || || || Sbjct 845 ACCTTGCAAGAAGG--CTTAATGCTAGAATGTTGGACGTGAATCCAAATCCCATTTGATA 902 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 |||||||| |||| ||| ||| | ||||||||||| ||| | ||| | ||||| | Sbjct 903 ATCTAAGTAAAGAAACTATAGAGGTTGAGGTATTTCACTGGCGACAAAA-GTCTCCCTCA 961 Query 245 TATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||| Sbjct 962 TATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 1020 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||| Sbjct 1021 TTCTTTCCCCGCTGAATATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGTAG 1080 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1081 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 1140 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 1200 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1201 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCACTTTCTG 1260 >seq34 Length=2752318 Score = 652 bits (722), Expect = 0.0 Identities = 472/540 (87%), Gaps = 7/540 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 16930 CTTTTGCTCTACACGAGATTTCTGTTCTCGTTGAGCCCCCCTTAGGACACCTGCGTTATT 16989 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||| ||||||||||| || || || Sbjct 16990 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACTTGACAATGTCAATTACTTGGGTC 17049 Query 127 GGCCCGC--GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 | || ||||| ||||| || |||| | | ||||| | | | || || || Sbjct 17050 ACCTTGCAAGAAGG--CTTAATGCTAGAATGTTGGACGTGAATCCAAATCCCATTTGATA 17107 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 |||||||| |||| ||| ||| | ||||||||||| ||| | ||| | ||||| | Sbjct 17108 ATCTAAGTAAAGAAACTATAGAGGTTGAGGTATTTCACTGGCGACAAAA-GTCTCCCTCA 17166 Query 245 TATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||| Sbjct 17167 TATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 17225 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||| Sbjct 17226 TTCTTTCCCCGCTGAATATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGTAG 17285 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17286 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 17345 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17346 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 17405 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 17406 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCACTTTCTG 17465 Score = 105 bits (116), Expect = 2e-20 Identities = 61/63 (97%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1912963 CCTTAAGAGAGTCCTAGTTACTCCCGCCGTTTACCCGCGCTCGGTTGAATTTCTTCACTT 1912904 Query 493 TGA 495 ||| Sbjct 1912903 TGA 1912901 >seq33 Length=10039 Score = 652 bits (722), Expect = 0.0 Identities = 472/540 (87%), Gaps = 7/540 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 8568 CTTTTGCTCTACACGAGATTTCTGTTCTCGTTGAGCCCCCCTTAGGACACCTGCGTTATT 8509 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||| ||||||||||| || || || Sbjct 8508 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACTTGACAATGTCAATTACTTGGGTC 8449 Query 127 GGCCCGC--GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 | || ||||| ||||| || |||| | | ||||| | | | || || || Sbjct 8448 ACCTTGCAAGAAGG--CTTAATGCTAGAATGTTGGACGTGAATCCAAATCCCATTTGATA 8391 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 |||||||| |||| ||| ||| | ||||||||||| ||| | ||| | ||||| | Sbjct 8390 ATCTAAGTAAAGAAACTATAGAGGTTGAGGTATTTCACTGGCGACAAAA-GTCTCCCTCA 8332 Query 245 TATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||| Sbjct 8331 TATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 8273 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||| Sbjct 8272 TTCTTTCCCCGCTGAATATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGTAG 8213 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8212 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 8153 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8152 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 8093 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 8092 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCACTTTCTG 8033 >seq8 Length=107663 Score = 652 bits (722), Expect = 0.0 Identities = 472/540 (87%), Gaps = 7/540 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 103985 CTTTTGCTCTACACGAGATTTCTGTTCTCGTTGAGCCCCCCTTAGGACACCTGCGTTATT 104044 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||| ||||||||||| || || || Sbjct 104045 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACTTGACAATGTCAATTACTTGGGTC 104104 Query 127 GGCCCGC--GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATT 184 | || ||||| ||||| || |||| | | ||||| | | | || || || Sbjct 104105 ACCTTGCAAGAAGG--CTTAATGCTAGAATGTTGGACGTGAATCCAAATCCCATTTGATA 104162 Query 185 GATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACT 244 |||||||| |||| ||| ||| | ||||||||||| ||| | ||| | ||||| | Sbjct 104163 ATCTAAGTAAAGAAACTATAGAGGTTGAGGTATTTCACTGGCGACAAAA-GTCTCCCTCA 104221 Query 245 TATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 ||||||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||| Sbjct 104222 TATTCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTC 104280 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||||||||||||||| | |||||||||||||||||||||||||||||||| ||| |||| Sbjct 104281 TTCTTTCCCCGCTGAATATGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGTAG 104340 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 104341 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 104400 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 104401 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 104460 Query 484 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 104461 TCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAAACCACTTTCTG 104520 >seq12 Length=4600585 Score = 477 bits (528), Expect = 3e-132 Identities = 441/546 (81%), Gaps = 16/546 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| |||| | |||||||| |||| ||||||||| ||| ||| ||||| Sbjct 192443 CTTTTGCTCTACACGAGAGTCCTGTTCTCGTTGAGCCCCCCTTAGAACATCTGTGTTATT 192384 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||| |||||||||||||||||||||||||||||| ||||||| | || || Sbjct 192383 GTTTAACAGGTGTGCCGCCCCAGCCAAACTCCCCACCTGAAAATGTCAGTTGCTTGGGTC 192324 Query 127 GGCCCGCGAAGGAC-CTTAACGCCAGAAAATGGTCG--GTGAAGACCA---GTTCCGCTT 180 | || || | ||||| || | | ||| | | | ||| | | | || ||| Sbjct 192323 ACCTTGCAAACAAGGCTTAAAGCTAAGATATGTTGGACGCGAATCCAAAAAGCCCCACTT 192264 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTC 239 || ||||| || | || ||| || | ||||||||||| ||| |||| | ||| Sbjct 192263 GATAACCTAAGTGAAGAGACCATAGAAGTTGAGGTATTTCACTGGCGACCGAG--GTCTC 192206 Query 240 CCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 || | ||||||||||| ||| | ||| ||||||| ||| |||||||||||||||| ||| Sbjct 192205 CCTCATATTCTACACC-CTCTATGTCTCTTCACAATGTCAGACTAGAGTCAAGCTCGACA 192147 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||| ||||| | |||||| || |||| ||||||||||||||||| ||| Sbjct 192146 GGGTCTTCTTTCCCTGCTGAATATGCCAAGACCTTTCC-TTGGCTGTGGTTTCGCTGGAT 192088 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTT-AATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||| || |||||||||| | ||||| || ||||||| Sbjct 192087 GGTAGATAGGGACAGTGGGAATCTCATTCAATCCATTCAC-CACGTCATTAGCTAGATGA 192029 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 || || | ||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 192028 CGGGGACT--GGCCACCTTAAGGAAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 191971 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| Sbjct 191970 TGAATTTCTTCACTTTGACATTCAGAGCACCGGGCAGAAATCATATTGCGTCAACACCAC 191911 Query 538 TTTCTG 543 |||||| Sbjct 191910 TTTCTG 191905 Score = 459 bits (508), Expect = 9e-127 Identities = 439/546 (80%), Gaps = 17/546 (3%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| |||| | |||||||| |||| ||||||||||||| ||| ||||| Sbjct 37424 CTTTTGCTCTACACGAGAGTCCTGTTCTCGTTGAG-CCCCCTTAGGACATCTGTGTTATT 37366 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| |||||||||||||||||||||||||||||||||||||| || ||| || Sbjct 37365 GTTTCACAGGTGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCAGTTACTCGGGTC 37306 Query 127 GGCCCGCGAAGGAC-CTTAACGCCAGAAAATGGTCG--GTGAAGACCA---GTTCCGCTT 180 | || || | ||||| || | | ||| | | | ||| | | | || ||| Sbjct 37305 ACCTTGCAAACAAGGCTTAAAGCTAAGATATGTTGGACGCGAATCCAAAAAGCCCCACTT 37246 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTC 239 || ||||| || | | ||| || | ||||||||||| ||| |||| | ||| Sbjct 37245 GATAACCTAAGTGAAGAGATCATAGAAGTTGAGGTATTTCACTGGCGACCGAG--GTCTC 37188 Query 240 CCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 || | ||||||||||| ||| | ||| ||||||| ||| ||||| |||||||||| ||| Sbjct 37187 CCTCATATTCTACACC-CTCTATGTCTCTTCACAATGTCAGACTAAAGTCAAGCTCGACA 37129 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 |||||||||||||| ||||| | |||||| || |||| ||||||||||||||||| ||| Sbjct 37128 GGGTCTTCTTTCCCTGCTGAATATGCCAAGACCTTTCC-TTGGCTGTGGTTTCGCTGGAT 37070 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTT-AATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||||||||||||||||||||||| || |||||||||| | || || || ||||| | Sbjct 37069 AGTAGATAGGGACAGTGGGAATCTCATTCAATCCATTCAC-CACGCCATTAGCTAGATCA 37011 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 | ||| | |||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 37010 C-AGGGACC-GGCTACCTCAAGGAAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 36953 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| | | Sbjct 36952 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCATAAATCACATTACGTCTACACCGC 36893 Query 538 TTTCTG 543 |||||| Sbjct 36892 TTTCTG 36887 >seq13 Length=37301 Score = 443 bits (490), Expect = 7e-122 Identities = 447/578 (77%), Gaps = 45/578 (8%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| |||| | |||||||| |||| ||||||||||||| ||| |||| Sbjct 11195 CTTTTGCTCTACACGAGAGTCCTGTTCTCGTTGAGCCCCCCTTAGGACATCTGTTTTATT 11254 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||||| || || || Sbjct 11255 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCAGTTACTTGGGTC 11314 Query 127 GGCCCGCGAAGGAC-CTTAACGCCAGAAAATGGTCG--GTGAAGACCA---GTTCCGCTT 180 | || || | ||||| || | | ||| | | | ||| | | | || ||| Sbjct 11315 ACCTTGCAAACAAGGCTTAAAGCTAAGATATGTTGGACGCGAATCCAAAAAGCCCCACTT 11374 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA--------- 231 | ||||| || | || ||| || | ||||||||||| ||| | | Sbjct 11375 GACAACCTAAGTGAAGAGACCATAGAAGTTGAGGTATTTCACTGGCGACCAGATGCTAAA 11434 Query 232 ------------AACGG-----------CTCCCACTTATTCTACA-CCTCTCAAGTCA-T 266 ||| | ||||| | |||||||| ||||| | ||| | Sbjct 11435 CTCTGCGCGAGCAACAGAGCCATCCAGTCTCCCTCATATTCTACGTCCTCT-AGGTCTCT 11493 Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||||||| ||| |||||||||||||||| ||||||||| ||||||| ||||| | |||| Sbjct 11494 TTCACAATGTCAGACTAGAGTCAAGCTCGACAGGGTCTCCTTTCCCTGCTGAATATGCCA 11553 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 || || |||||||||||||||||||||| ||| |||||||||||||||||||||||| || Sbjct 11554 AGACCTTTCCCTTGGCTGTGGTTTCGCTGGATGGTAGATAGGGACAGTGGGAATCTCATT 11613 Query 387 -AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC 445 |||||||||| | ||||| || ||||||||| || | |||||||||||| |||| Sbjct 11614 CAATCCATTCAC-CACGTCATTAGCTAGATGACGGGGACT--GGCTACCTTAAGGAAGTC 11670 Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11671 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 11730 Query 506 ACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||| ||||||||| Sbjct 11731 ACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 11768 Score = 439 bits (486), Expect = 8e-121 Identities = 447/578 (77%), Gaps = 46/578 (8%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| |||| | |||||||| |||| ||||||||||||| ||| |||| Sbjct 6165 CTTTTGCTCTACACGAGAGTCCTGTTCTCGTTGAG-CCCCCTTAGGACATCTGTTTTATT 6107 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||||| || || || Sbjct 6106 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCAGTTACTTGGGTC 6047 Query 127 GGCCCGCGAAGGAC-CTTAACGCCAGAAAATGGTCG--GTGAAGACCA---GTTCCGCTT 180 | || || | ||||| || | | ||| | | | ||| | | | || ||| Sbjct 6046 ACCTTGCAAACAAGGCTTAAAGCTAAGATATGTTGGACGCGAATCCAAAAAGCCCCACTT 5987 Query 181 CATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA--------- 231 | ||||| || | || ||| || | ||||||||||| ||| | | Sbjct 5986 GACAACCTAAGTGAAGAGACCATAGAAGTTGAGGTATTTCACTGGCGACCAGATGCTAAA 5927 Query 232 ------------AACGG-----------CTCCCACTTATTCTACA-CCTCTCAAGTCA-T 266 ||| | ||||| | |||||||| ||||| | ||| | Sbjct 5926 CTCTGCGCGAGCAACAGAGCCATCCAGTCTCCCTCATATTCTACGTCCTCT-AGGTCTCT 5868 Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||||||| ||| |||||||||||||||| ||||||||| ||||||| ||||| | |||| Sbjct 5867 TTCACAATGTCAGACTAGAGTCAAGCTCGACAGGGTCTCCTTTCCCTGCTGAATATGCCA 5808 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 || || |||||||||||||||||||||| ||| |||||||||||||||||||||||| || Sbjct 5807 AGACCTTTCCCTTGGCTGTGGTTTCGCTGGATGGTAGATAGGGACAGTGGGAATCTCATT 5748 Query 387 -AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC 445 |||||||||| | ||||| || ||||||||| || | |||||||||||| |||| Sbjct 5747 CAATCCATTCAC-CACGTCATTAGCTAGATGACGGGGACT--GGCTACCTTAAGGAAGTC 5691 Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5690 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 5631 Query 506 ACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||| ||||||||| Sbjct 5630 ACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 5593 >seq36 Length=5949 Score = 403 bits (446), Expect = 6e-110 Identities = 445/578 (77%), Gaps = 55/578 (10%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||||||| |||| | |||||||| |||| ||||||||||||| ||| |||| Sbjct 4954 CTTTTGCTCTACACGAGAGT-CTGTTCTCGTTGAG-CCCCCTTAGGACATCTGTTTTATT 5011 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||| ||||||||||||||||||||||||||| || || || Sbjct 5012 GTTTAACAGATGTGCCGCCC-AGCCAAACTCCCCACCTGACAATGTCAGTTACTGGG-TC 5069 Query 127 GGCCCGCGA--AGGACCTTAACGCCAGAAAATGGTCG--GTGAAGACCAGTTCCGCTTCA 182 | || | ||| ||||| || | | ||| | | | ||| | | | | | Sbjct 5070 ACCTTGCAACAAGG--CTTAAAGCTAAGATATGTTGGACGCGAATCCAAAAAGCCCCAC- 5126 Query 183 TTGAT---TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-------- 231 |||| ||||| || | || ||| || | ||||||||||| ||| | | Sbjct 5127 TTGAAACCTAAGTGAAGAGAC-ATAGAAGTTGAGGTATTTCACTGGCGACCAGATGCTAA 5185 Query 232 ------------AACGG-----------CTCCCACTTATTCTACA-CCTCTCAAGTCA-T 266 ||| | ||||| | ||| |||| ||||| | ||| | Sbjct 5186 ACCTGCGCGAGCAACAGAGCCATCCAGTCTCCCTCATAT-CTACGTCCTCT-AGGTCTCT 5243 Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||||||| ||| |||||||||||||||| ||||||||| ||||||| ||||| | |||| Sbjct 5244 TTCACAATGTCAGACTAGAGTCAAGCTCGACAGGGTCTCCTTTCCCTGCTGAATATGCCA 5303 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 || || |||| ||||||||||||||||| ||| |||||||||||||||||||||||| || Sbjct 5304 AGACCTTTCC-TTGGCTGTGGTTTCGCTGGATGGTAGATAGGGACAGTGGGAATCTCATT 5362 Query 387 -AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTC 445 |||||||||| | ||||| || ||||||||| || | |||||||||||| |||| Sbjct 5363 CAATCCATTCAC-CACGTCATTAGCTAGATGACGGGGACT--GGCTACCTTAAGGAAGTC 5419 Query 446 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5420 ATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC 5479 Query 506 ACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||| ||||||||| Sbjct 5480 ACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 5517 >seq1 Length=4845341 Score = 203 bits (224), Expect = 1e-49 Identities = 208/264 (79%), Gaps = 7/264 (3%) Strand=Plus/Plus Query 192 TaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAA--ACGGCTCCCACTTATTC 249 |||| |||| ||| | ||| | ||| |||| | | ||| ||| ||||| | |||| Sbjct 2541146 TAAAGAAACTATAGAGCTAGAGATATCTCACATCTGGCGACCGACGTCTCCCTCATATTT 2541205 Query 250 TACACCTCTCAAGTCAT-TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 |||||| ||| | | | ||||||| ||| || |||| | ||| ||||| | |||||| Sbjct 2541206 TACACC-CTCGATGCCTCTTCACAACGTCAAACCAGAGGCTAGCCCAACATCGCCTTCTT 2541264 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||||| || |||||||| |||||| |||||| ||||||||| ||| || |||| Sbjct 2541265 TCCCCGCCTATAT-GCCAAGCC-GTTCCCCTGGCTGCGGTTTCGCTGGATGGTGACTAGG 2541322 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 | ||||||||| ||| |||||||||||||||||||| |||||||||||||| || ||||| Sbjct 2541323 GGCAGTGGGAAGCTCTTTAATCCATTCATGCGCGTCGCTAATTAGATGACGTGGGATTTG 2541382 Query 429 GCTACCTTAAGAGAGTCATAGTTA 452 |||||||||||| | ||||||||| Sbjct 2541383 GCTACCTTAAGA-AATCATAGTTA 2541405 Score = 111 bits (122), Expect = 5e-22 Identities = 177/246 (72%), Gaps = 11/246 (4%) Strand=Plus/Plus Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG-ATAGT 361 |||||| || || || | ||||| | || | || || | ||||||| | || || Sbjct 1717050 CTTCTTCCCTCGTCGAATATGCCAAACTCGCTTTTTTAGCCGGCGTTTCGCAGGGATGGT 1717109 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA-CGA 420 |||| ||| ||| ||||| || | ||||| || ||| ||| || || | | | Sbjct 1717110 TGATAAAGACCGTGCGAATCGCGCCAT---ATTCA-GCCTGTCGCTAGTTGGAAGCTCAA 1717165 Query 421 GGCATTTGGCTACCTTA---AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||| | ||| ||||| |||||| | ||| ||||||| |||| || ||| ||| || Sbjct 1717166 GGCGCTCTGCTTCCTTATGAAGAGAG-CGTAGCTACTCCCTCCGTCTATCCGGGCTCGGC 1717224 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCAC 537 |||||||||||||||||||||||||||| | || |||| | | ||||| ||||| | ||| Sbjct 1717225 TGAATTTCTTCACTTTGACATTCAGAGCGCAGGCCAGATACCGCATTGTGTCAA-ACCAC 1717283 Query 538 TTTCTG 543 |||||| Sbjct 1717284 TTTCTG 1717289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199198752