Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Syncephalastrum_20racemosum_20[genbank_20GCA_5F002105135.1_202017- 04-20] 49 sequences; 30,745,403 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq34 96.9 1e-14 >seq34 Length=2752318 Score = 96.9 bits (106), Expect = 1e-14 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 89025 GTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATAATCGACCTCCTTCGCAAG 89084 || |||||||| | ||||| || || || |||||| || ||| | | ||| | Sbjct 125519 GTCGACGACTCCATTGTGCGTGGTACGACCTCCAAGGAAATCATCCAGATGGCGCGCGAC 125578 Query 89085 TCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGTTACCCCAACGTG 89144 | ||||||| || ||||| | ||||| ||| | || | ||||| ||||| |||||| Sbjct 125579 GCGGGCGCCAAGAAAGTCTATTTTGCTTCGTGCGCACCTGCCATCCGATACCCTAACGTG 125638 Query 89145 TACGGCATCGACATACCGTCGGCCAAGGAGCTCATTGCTTCTGGTCGCACCGAGCACGAG 89204 |||||||||||||| ||| ||| ||||| | ||| || ||||||||| | ||| Sbjct 125639 TACGGCATCGACATGCCGAGCCGCAAAGAGCTTGTCGCTCATGATCGCACCGATGAAGAG 125698 Query 89205 GTGGC-TCTCCTCCTCGGAGCCGACCAGGTCATCTATCAGAGTGTCGACGAC 89255 | || ||| | || || ||| |||| ||||| |||| | |||| ||| Sbjct 125699 ATCGCGTCT-GAAATTGGTGCAGACAAGGTTATCTACCAGAATCTCGAGGAC 125749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084737859252102