Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq697 279 8e-73 >seq697 Length=12922 Score = 279 bits (308), Expect = 8e-73 Identities = 209/244 (86%), Gaps = 16/244 (7%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| | || ||||| |||||||||||||||| | Sbjct 6421 GTACAAAGGGCAGGGACGTAATCAACGCAATCT-GATGAACTGCGCTTACTAGGAATT-C 6478 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| ||||||||||||||| ||||||||| ||||||||| ||||| |||||| Sbjct 6479 CTCGTTCAAGTCCAACAATTGCAATGGACTATCCCCAGCACGATGAAGTTTCACAAGATT 6538 Query 120 ACCCGGACCTGTCGGCCAAGG-------------TGATAGACTCGTTGAATACATCAGTG 166 |||| ||||| |||||||||| || | ||||||||| | |||||||| Sbjct 6539 ACCCAGACCTTTCGGCCAAGGACTTGCATTTTACTGCTTTACTCGTTGACTTCATCAGTG 6598 Query 167 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6599 TAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 6658 Query 227 CCGT 230 |||| Sbjct 6659 CCGT 6662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751985765110