Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq697 212 3e-52 >seq697 Length=12922 Score = 212 bits (234), Expect = 3e-52 Identities = 244/324 (75%), Gaps = 22/324 (7%) Strand=Plus/Minus Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 ||||| ||||| || || || | ||||||||| |||||||||||||||||| |||| Sbjct 4564 GGATGTTGGCGAAAAGGCACCAATTGACCCGTCTTGAAACACGGACCAAGGAGTCCAACA 4505 Query 441 TCTATGCGAGTGTTTGGGTGTC-AAACCCGTGCGCGTAATGAAAGTGAACG------GAG 493 | ||||||||| | |||| | |||||| |||||||||||||||| ||| Sbjct 4504 TATATGCGAGTATATGGGAATTTAAACCCACATGCGTAATGAAAGTGAAACATTTTTGAG 4445 Query 494 GTGGGAAC-----CCGTGAGG-----GTGCACCATCGACCGATCCT-GATGTCTTCGGAT 542 || || | || | || | ||| || | |||| | ||| | | | | Sbjct 4444 -TGTGACCAATTTCCTTTTGGAAGTTGAGCAACACCAACCGGCTTTAGATAGCGTTGCTT 4386 Query 543 GG---ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 599 | | |||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 4385 GACAAAGCTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAAT 4326 Query 600 AGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGAT 659 ||||||||| |||||||||||||| |||| ||||| || | ||||| ||||||||||||| Sbjct 4325 AGGGTGAAGTCAGAGGAAACTCTGATGGAAGCTCGTAGAGATTCTGACGTGCAAATCGAT 4266 Query 660 CGTCAAATTTGGGTATAGGGGCGA 683 | ||||||||||||||||||||| Sbjct 4265 CTCCAAATTTGGGTATAGGGGCGA 4242 Score = 208 bits (230), Expect = 3e-51 Identities = 141/157 (90%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||| Sbjct 5046 GAGTCGGGTTGTTTGGGAATGCAGCCCTAATTTGGAGGTAAATTTCTTCTAAAGCTAAAT 4987 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| ||||||||||||| ||||||| |||| |||||||||||||||||||| || Sbjct 4986 ACTGGCAAGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGAAA 4927 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||| | ||||| |||||||||||||||||||||| Sbjct 4926 AGAGAG-TGAAAAGTACGTGAAATTGTTGAAAGGGAA 4891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079958086700