Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1005 159 3e-34 >seq1005 Length=21531 Score = 159 bits (176), Expect = 3e-34 Identities = 550/839 (66%), Gaps = 18/839 (2%) Strand=Plus/Minus Query 61084 GATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGAT 61143 || |||||| ||||||||||||||| ||||| || |||||||| | || ||||| ||| Sbjct 9883 GAGATTTGGAACATGTACAAAAAGGCCGAAGCATCGTTCTGGACTGCCGAAGAGGTTGAT 9824 Query 61144 TTGTCCAAAGACATGAATGACTGGGAGCGTTTA-TCGAG--CGGTGAACAACATTTCATT 61200 | | | || || | ||||||| | || | | |||| | |||| || Sbjct 9823 CTAGCGCATGATATTGAGCACTGGGAAAACAAACTCAATGACAATGAAAGATATTTTATC 9764 Query 61201 AAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT-TTATTGGA 61259 ||||| | |||| || ||||| || || ||||| || || ||||| ||| || || Sbjct 9763 AAACACATTCTGGCCTTTTTTGCAGCCTCAGACGGAATAGTGAATGAAAATCTTGTTTTT 9704 Query 61260 ACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGC 61319 | ||| | || |||| || | | || || ||| | |||||||| ||||| ||| Sbjct 9703 AACTTTGGTAAAG-AGGTTCAGATACCAGAAGCACGTAGCTTCTACGGATTCCAAATTAT 9645 Query 61320 CATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCG 61379 ||||||||| ||||| || |||||| | | || || || ||||| | ||| Sbjct 9644 GATGGAGAATATCCACAGTGAAATGTACTCACTCTTGATAGACACATACATTAAGGATGA 9585 Query 61380 GGCGGAACGTGAACGAT-TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438 || ||| || | | | ||||| || | || | || || | | || |||| Sbjct 9584 AGCAGAAAA-GAGCTACCTTTTCAACGCAGTTGAAAACATTCCCTGTATCAGACGCAAAG 9526 Query 61439 CGGATTGGGCCTTCAATTGGATCACCAG-TACAACGGCTACATTTGGTGAACGA-TTGCT 61496 | | ||||| || || ||||| | || || ||| | ||||| || || ||||| Sbjct 9525 CCCAATGGGCATTAAAATGGAT-AGAAGATAAGGAGGCCAGCTTTGGAGAGCGTCTTGCT 9467 Query 61497 GGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTT 61556 | |||| || || |||||||||| ||||| || || ||||| || ||||| ||||| Sbjct 9466 G-CATTCGCTGTAATCGAGGGTGTCTTTTTTTCAGGCTCCTTTGCTGCCATCTTCTGGTT 9408 Query 61557 GAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGA 61616 ||||||| | || || ||||| || || || ||| || || | || | | ||||| Sbjct 9407 GAAGAAAAGAGGGCTCATGCCAGGCCTTACATTCTCAAACGAACTTATCTGTAGGGACGA 9348 Query 61617 GGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTC 61676 |||| | || ||||||| | || | || | | || ||| | || || Sbjct 9347 GGGCCTTCACACAGATTTTGGATGTCTGTTGTTTA---GGTACCTGCAAAGAAAACCATC 9291 Query 61677 GGAGGAGCGTGTGGGTGAG-ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGA 61735 ||||| | |||| ||||| || || || | || ||||| || ||| | | Sbjct 9290 AGAGGAAAAAATCT-TGAGCATTGTCACAGAAGCCGTTAGCATTGAACAAGAGTTTTTAA 9232 Query 61736 CTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTG 61795 | || || ||||| ||||| || || || ||||| | || |||| || || |||| Sbjct 9231 CAGATGCATTGCCAGTCTCGCTTATTGGAATGAACCAAGTGCTCATGTGTCAATACATTG 9172 Query 61796 AATTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAA 61854 ||||||||||||| | ||| | || | | |||||| |||| ||| || || | Sbjct 9171 AATTTGTTGCCGATAGACTGCTAGTTGAACTTGGGT-TGAACAAACACTACAACACAACC 9113 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 |||||||| || ||||| |||||||| || | ||||| || || || || ||||| Sbjct 9112 AACCCATTCAGCTTTATGGATATGATTTCAATGCAGGGCAAAACCAACTTCTTTGAGAA 9054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558532166560