Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq189 277 3e-72 >seq189 Length=79730 Score = 277 bits (306), Expect = 3e-72 Identities = 203/230 (88%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 18078 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 18021 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| |||||||||| ||||||||| ||||| | ||| | |||||| Sbjct 18020 CTCGTTGAAGGGCAATAATTGCAATGCCCTATCCCCAGCACGACGGGGTTTAACAAGATT 17961 Query 120 ACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| |||||||||| ||||| ||||||| | |||||||||||||||||| Sbjct 17960 ACCCAGACCTTTCGGCCAAGGATGATA--CTCGTTGGCCCCGTCAGTGTAGCGCGCGTGC 17903 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17902 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 17853 Score = 277 bits (306), Expect = 3e-72 Identities = 203/230 (88%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 28945 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 28888 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| |||||||||| ||||||||| ||||| | ||| | |||||| Sbjct 28887 CTCGTTGAAGGGCAATAATTGCAATGCCCTATCCCCAGCACGACGGGGTTTAACAAGATT 28828 Query 120 ACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| |||||||||| ||||| ||||||| | |||||||||||||||||| Sbjct 28827 ACCCAGACCTTTCGGCCAAGGATGATA--CTCGTTGGCCCCGTCAGTGTAGCGCGCGTGC 28770 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28769 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 28720 Score = 277 bits (306), Expect = 3e-72 Identities = 203/230 (88%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 39812 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 39755 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| |||||||||| ||||||||| ||||| | ||| | |||||| Sbjct 39754 CTCGTTGAAGGGCAATAATTGCAATGCCCTATCCCCAGCACGACGGGGTTTAACAAGATT 39695 Query 120 ACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| |||||||||| ||||| ||||||| | |||||||||||||||||| Sbjct 39694 ACCCAGACCTTTCGGCCAAGGATGATA--CTCGTTGGCCCCGTCAGTGTAGCGCGCGTGC 39637 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39636 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 39587 Score = 277 bits (306), Expect = 3e-72 Identities = 203/230 (88%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 50679 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 50622 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| |||||||||| ||||||||| ||||| | ||| | |||||| Sbjct 50621 CTCGTTGAAGGGCAATAATTGCAATGCCCTATCCCCAGCACGACGGGGTTTAACAAGATT 50562 Query 120 ACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| |||||||||| ||||| ||||||| | |||||||||||||||||| Sbjct 50561 ACCCAGACCTTTCGGCCAAGGATGATA--CTCGTTGGCCCCGTCAGTGTAGCGCGCGTGC 50504 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50503 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 50454 Score = 277 bits (306), Expect = 3e-72 Identities = 203/230 (88%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 61538 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 61481 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| |||||||||| ||||||||| ||||| | ||| | |||||| Sbjct 61480 CTCGTTGAAGGGCAATAATTGCAATGCCCTATCCCCAGCACGACGGGGTTTAACAAGATT 61421 Query 120 ACCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| ||||| |||||||||| ||||| ||||||| | |||||||||||||||||| Sbjct 61420 ACCCAGACCTTTCGGCCAAGGATGATA--CTCGTTGGCCCCGTCAGTGTAGCGCGCGTGC 61363 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61362 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 61313 Score = 266 bits (294), Expect = 5e-69 Identities = 201/229 (88%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| | Sbjct 7260 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGAATT-C 7203 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||| ||| |||||||||| ||||||||| ||||| | || ||| ||||| Sbjct 7202 CTCGTTGAAGGGCAATAATTGCAATGCCCTATCCCCAGCACGACGGGTTTACAA-GATTA 7144 Query 121 CCCGGACCTGTCGGCCAAGG-TGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| |||||||||| ||||| ||||||| | ||||||||||||||||||| Sbjct 7143 CCCAGACCTTTCGGCCAAGGATGATA--CTCGTTGGCCCCGTCAGTGTAGCGCGCGTGCG 7086 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 ||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 7085 GCCCAGAACATCTAA-GGCATCACAGACCTGTTATTGCCTCAAACTTCC 7038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751996998580