Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq50 107 5e-21 >seq50 Length=231088 Score = 107 bits (118), Expect = 5e-21 Identities = 193/279 (69%), Gaps = 5/279 (2%) Strand=Plus/Minus Query 4 GGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCC 63 || || || | |||| ||| || ||| ||||||||| ||| | | |||||||| Sbjct 28063 GGGTAAACAGTATCTGCACTGCTATTCCAATTTCACAGAGCCAATCATCGAGACAGCTGT 28004 Query 64 GCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTA 123 ||||||||| ||||| ||| || | | | ||| | | |||| ||||||||||||| Sbjct 28003 TGTATCGTTACGTCATTCATGCGGGACTGCATTTAACAGCCAAGAGATTTCGCTACCTTT 27944 Query 124 GGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT--AG 181 ||||| | || | || ||||||| || ||| ||| || |||| | || | || | Sbjct 27943 GGACCCTCATAGGTAAGGCCGCCATTAACC-GGGTATCCTTCAAAACCTAACCTTTAAAA 27885 Query 182 CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTT 241 ||| || |||||| |||| | ||||||| |||||| | |||| | | ||| Sbjct 27884 TTAAGAAACTCCGTTAACCAGCCGGGATCGGGCAGAGATCACACTCAATACATTGAATTT 27825 Query 242 CGTGT--TTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | ||||| |||||| |||||| | |||||||||| Sbjct 27824 TATCTTATTGCAAAGTGCTTTGTTTTAATTAAACAGTCG 27786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260794805504