Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq189 352 5e-95 >seq189 Length=79730 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17935 TACTCGTTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 17876 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||| Sbjct 17875 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAAA 17817 Query 121 CACCAACCATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | | | || ||| || ||||||||||||||||||||||||||||||||| |||| Sbjct 17816 CGCGAGCGAAAGCTCGCCTGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 17758 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 17757 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAG 17698 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 17697 AAAGAGCTCTCAATCTGTC 17679 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 28802 TACTCGTTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 28743 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||| Sbjct 28742 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAAA 28684 Query 121 CACCAACCATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | | | || ||| || ||||||||||||||||||||||||||||||||| |||| Sbjct 28683 CGCGAGCGAAAGCTCGCCTGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 28625 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 28624 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAG 28565 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 28564 AAAGAGCTCTCAATCTGTC 28546 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39669 TACTCGTTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 39610 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||| Sbjct 39609 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAAA 39551 Query 121 CACCAACCATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | | | || ||| || ||||||||||||||||||||||||||||||||| |||| Sbjct 39550 CGCGAGCGAAAGCTCGCCTGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 39492 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 39491 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAG 39432 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 39431 AAAGAGCTCTCAATCTGTC 39413 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50536 TACTCGTTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 50477 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||| Sbjct 50476 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAAA 50418 Query 121 CACCAACCATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | | | || ||| || ||||||||||||||||||||||||||||||||| |||| Sbjct 50417 CGCGAGCGAAAGCTCGCCTGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 50359 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 50358 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAG 50299 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 50298 AAAGAGCTCTCAATCTGTC 50280 Score = 352 bits (390), Expect = 5e-95 Identities = 236/259 (91%), Gaps = 3/259 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61395 TACTCGTTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 61336 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| || ||| |||||||||||||||||||| Sbjct 61335 ACCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCAAA 61277 Query 121 CACCAACCATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | | | | | || ||| || ||||||||||||||||||||||||||||||||| |||| Sbjct 61276 CGCGAGCGAAAGCTCGCCTGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATT 61218 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 61217 AAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACATAATCAAG 61158 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| |||||||||| Sbjct 61157 AAAGAGCTCTCAATCTGTC 61139 Score = 300 bits (332), Expect = 3e-79 Identities = 228/259 (88%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 7119 TACTCGTTGGCCCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAA-GGCATCACAG 7061 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||| Sbjct 7060 ACCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCAAA 7002 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGG-TTAAGGTCTCGTTCGTTATCGGAATT 179 | | | | | ||| |||||||||||||| ||||||||||||||||||||| |||| Sbjct 7001 CGCGAGCGAAGCTCG-CCTGGCTATTTAGCAGGTTTAAGGTCTCGTTCGTTATCGCAATT 6943 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 | |||||||||||||||| ||||||||||||||||||||||||||||| | |||||| Sbjct 6942 -AGCAGACAAATCACTCCA-CAACTAAGAACGGCCATGCACCACCACCC--AATATCAAG 6887 Query 240 AAAGAGCTATCAATCTGTC 258 |||||||| || ||||||| Sbjct 6886 AAAGAGCTCTC-ATCTGTC 6869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796796819772