Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq189 174 2e-41 >seq189 Length=79730 Score = 174 bits (192), Expect = 2e-41 Identities = 121/135 (90%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 16952 CTCTAGAAACCAACAAAATAGAACCGC-CGTCCTATTCTATTATTCCATGCTAATGTATT 16894 Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 || ||||| |||||||||||||||||||||||| |||| |||||||||| || ||| | | Sbjct 16893 CGAGCGTAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCCGGATCCCCAG 16834 Query 124 CACA-CCAATGAAGG 137 |||| ||| |||||| Sbjct 16833 CACACCCAGTGAAGG 16819 Score = 174 bits (192), Expect = 2e-41 Identities = 121/135 (90%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 27819 CTCTAGAAACCAACAAAATAGAACCGC-CGTCCTATTCTATTATTCCATGCTAATGTATT 27761 Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 || ||||| |||||||||||||||||||||||| |||| |||||||||| || ||| | | Sbjct 27760 CGAGCGTAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCCGGATCCCCAG 27701 Query 124 CACA-CCAATGAAGG 137 |||| ||| |||||| Sbjct 27700 CACACCCAGTGAAGG 27686 Score = 174 bits (192), Expect = 2e-41 Identities = 121/135 (90%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 38686 CTCTAGAAACCAACAAAATAGAACCGC-CGTCCTATTCTATTATTCCATGCTAATGTATT 38628 Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 || ||||| |||||||||||||||||||||||| |||| |||||||||| || ||| | | Sbjct 38627 CGAGCGTAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCCGGATCCCCAG 38568 Query 124 CACA-CCAATGAAGG 137 |||| ||| |||||| Sbjct 38567 CACACCCAGTGAAGG 38553 Score = 174 bits (192), Expect = 2e-41 Identities = 121/135 (90%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 49553 CTCTAGAAACCAACAAAATAGAACCGC-CGTCCTATTCTATTATTCCATGCTAATGTATT 49495 Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 || ||||| |||||||||||||||||||||||| |||| |||||||||| || ||| | | Sbjct 49494 CGAGCGTAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCCGGATCCCCAG 49435 Query 124 CACA-CCAATGAAGG 137 |||| ||| |||||| Sbjct 49434 CACACCCAGTGAAGG 49420 Score = 174 bits (192), Expect = 2e-41 Identities = 121/135 (90%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct 60412 CTCTAGAAACCAACAAAATAGAACCGC-CGTCCTATTCTATTATTCCATGCTAATGTATT 60354 Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 || ||||| |||||||||||||||||||||||| |||| |||||||||| || ||| | | Sbjct 60353 CGAGCGTAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCCGGATCCCCAG 60294 Query 124 CACA-CCAATGAAGG 137 |||| ||| |||||| Sbjct 60293 CACACCCAGTGAAGG 60279 Score = 140 bits (154), Expect = 4e-31 Identities = 155/194 (80%), Gaps = 12/194 (6%) Strand=Plus/Minus Query 4 CTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATT 63 ||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||| | Sbjct 6152 CTCTAGAAACCAACAAA-TAGAACCGC-CGTCCTATTCTATTAT-CCATGCTAATGT--T 6098 Query 64 CGGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCG 123 || ||||| |||||||||||||||||||||||| |||| |||||||||| || ||| | | Sbjct 6097 CGAGCGTA-GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCCGGATCC-CAG 6040 Query 124 CACA-CCAATGAA-GGCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCG 181 |||| ||| |||| |||||| |||| || ||| | | | || | |||| | || Sbjct 6039 CACACCCAGTGAAGGGCATA--GGCTAGCCGGAAGGAAAGCCCCGGCGAACCAGTGCACG 5982 Query 182 CCGTGAGGCGGACC 195 ||| ||||||||| Sbjct 5981 -CGTTAGGCGGACC 5969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595197624408