Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20EF0021_20[genbank_20GCA_5F000292665.1_202012-08-21] 2,051 sequences; 44,372,120 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1847 289 1e-75 seq163 215 2e-53 >seq1847 Length=321979 Score = 289 bits (320), Expect = 1e-75 Identities = 216/253 (85%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 431 GAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACG 490 ||||||| ||||||| ||| | ||||||| |||||||| | | ||| |||||||| |||| Sbjct 89324 GAGTCTACCATCTATACGAATATTTGGGTATCAAACCCATACACGTTATGAAAGTAAACG 89383 Query 491 GAGGTGGGAACCCGTGAG----GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGAT 546 ||||| ||||| | ||| || |||| |||||||| |||||||| | ||||| Sbjct 89384 GAGGTAAAAACCCTTTCTTTGCGGTACATTATCGTCCGATCCTAATGTCTTCAGGTGGAT 89443 Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 |||||||||||||||||| || ||||||||||||| ||||||||||| ||||||| |||| Sbjct 89444 TTGAGTAAGAGCATAGCTATTAGGACCCGAAAGATAGTGAACTATGCATGAATAGAGTGA 89503 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 |||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| Sbjct 89504 AGCCAGAGGAAACTCTAGTAGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAA 89563 Query 667 TTTGGGTATAGGG 679 |||| |||||||| Sbjct 89564 TTTGCGTATAGGG 89576 Score = 77.0 bits (84), Expect = 1e-11 Identities = 90/118 (76%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 517 ATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCC-G 575 ||| ||| || | |||||| ||| ||| |||||| ||| |||||| ||||||||||| | Sbjct 60645 ATCAACCAATTCAGATGTCATCGAATG-ATTTGAATAA-AGCATACTTGTTGGGACCCAG 60702 Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633 || | || |||||||| ||||| ||||||| | |||||| |||| |||||| Sbjct 60703 AAGAAAAGTAAACTATGCTAGAATATAGTGAAGCACGGAGAAACTATGGTAAAGGCTC 60760 >seq163 Length=360055 Score = 215 bits (238), Expect = 2e-53 Identities = 194/242 (80%), Gaps = 9/242 (4%) Strand=Plus/Plus Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCG---TAATGAAAGTGAACGGAGGTGGG 498 ||||||||||||| ||||| ||| | ||| || || ||||| || |||| | Sbjct 247702 CTATGCGAGTGTT-----GTCAACCCCTTATGCGCCTTAGTGGAAGTGGACTGAGGCAAG 247756 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 | || || || ||||| ||| |||||||||||||| ||| ||||||||||||||||||| Sbjct 247757 AGCCTGTCAGTGTGCATTATCAACCGATCCTGATGTTTTCAGATGGATTTGAGTAAGAGC 247816 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG-GAA 617 | |||||||| ||||| ||||| ||||||||| |||||||| | |||| |||| ||| Sbjct 247817 AACGCTGTTGGAGGCCGAATGATGGCGAACTATGCGTGAATAGGATAAAGCTAGAGCGAA 247876 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 || |||||||||||||||||||| || | ||||||||||||||||| |||| |||||| Sbjct 247877 TGTCAGGTGGAGGCTCGCAGCGGTTTTGACATGCAAATCGATCGTCAACTTTGCGTATAG 247936 Query 678 GG 679 || Sbjct 247937 GG 247938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079956006050