Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq20 185 5e-45 seq5 100 2e-19 seq37 71.6 8e-11 >seq20 Length=768899 Score = 185 bits (204), Expect = 5e-45 Identities = 112/117 (96%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 757907 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 757849 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 757848 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 757792 Score = 185 bits (204), Expect = 5e-45 Identities = 112/117 (96%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| || Sbjct 767476 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 767418 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 767417 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 767361 >seq5 Length=1427630 Score = 100 bits (110), Expect = 2e-19 Identities = 96/118 (81%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 2 AACCCAAAGACTTTG-ATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||| | | ||||||||||||||||||| |||||||||| ||||||||| || Sbjct 189817 AACCCAAAGGCAATCCATTTCTCGTAAGGTGCCGAACGAGTCAAAAA-ATAACATCGTCC 189875 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACG-ACGGTATCTGATC-GTCTTCG 116 || ||||||||||||||||||| | | ||| | | ||||||||||| ||| ||| Sbjct 189876 GACCCCTAGTCGGCATAGTTTATGACGGGGGCTAGGAATGGTATCTGATCAGTCCTCG 189933 >seq37 Length=548982 Score = 71.6 bits (78), Expect = 8e-11 Identities = 57/69 (83%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 ||||||| ||||||||| |||||||||||||| ||| ||| |||||| |||||| | Sbjct 159028 ATAACATTATCCGATCCCTTGTCGGCATAGTTTATGGTCAAGCCTACGATATTATCTGGT 158969 Query 109 CGTCTTCGA 117 || |||||| Sbjct 158968 CGCCTTCGA 158960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399728560