Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20No.14919_20[genbank_20GCA_5F002003505.1_202017-02-04] 104 sequences; 48,734,900 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq20 733 0.0 seq25 333 1e-88 seq13 156 2e-35 >seq20 Length=768899 Score = 733 bits (812), Expect = 0.0 Identities = 564/663 (85%), Gaps = 6/663 (1%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 759338 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 759397 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 759398 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGGGATCGAAAGA 759457 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| |||||| |||||||||||||||||||||||||||| || Sbjct 759458 TGAAAAGCACTTTGAAAAGAGGGTTAAATAGCACGTGAAATTGTTGAAAGGGAAGCGTTT 759517 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCC-CTCGGCCGGTGCACTCTTCTGCGG 261 || ||||||| | || || | ||| |||| ||| |||||||||| || || Sbjct 759518 GCGACCAGACCTTTTCGTAGCGGATCATCCGGTGTTCTCA-CCGGTGCACTTCGCTTCGT 759576 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 | ||||||||||| | | | | ||||||| || ||||| || || |||| || Sbjct 759577 TTAGGCCAGCATCGGTTTCTGTAGGGGGATAAAAGCTTGGGGAACGTAGCTCCCTC--GG 759634 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCG-GCTA 380 | |||||||||||| | ||| | | |||| |||| ||||||| || | Sbjct 759635 GAGTGTTATAGCCCCTCGCATAATACCTTTA-CGGGGACCGAGGACCGCGCTTTATGCAA 759693 Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440 |||||||||||||||||| || | || ||||||||| |||||||||||||||||| |||| Sbjct 759694 GGATGCTGGCGTAATGGTCGTCAACGACCCGTCTTGAAACACGGACCAAGGAGTCGAACA 759753 Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 | ||||||||||||||||||| |||||| ||||||||||||||||||||||||| | Sbjct 759754 TTTATGCGAGTGTTTGGGTGTTAAACCCTCACGCGTAATGAAAGTGAACGGAGGTGAGGG 759813 Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560 ||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 759814 CCCTTACGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 759873 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620 | ||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 759874 AACTGTTCGGACCCGAAAGATGGTGAACTATGCGTGGATAGGGTGAAGCCAGAGGAAACT 759933 Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680 ||||||||||||||||||||||||| ||||||||||||||||||||| || | || |||| Sbjct 759934 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATCTGCGCATGGGGG 759993 Query 681 CGA 683 ||| Sbjct 759994 CGA 759996 >seq25 Length=698551 Score = 333 bits (368), Expect = 1e-88 Identities = 245/285 (86%), Gaps = 4/285 (1%) Strand=Plus/Minus Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 |||| |||||||||||| || | || ||||||||| |||||||||||||||||| | ||| Sbjct 617359 GATGATGGCGTAATGGTCGTTAACGACCCGTCTTGAAACACGGACCAAGGAGTCGACCAT 617300 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501 |||||||||||||||| ||||| ||| | ||||||||||||||||||||||| || | Sbjct 617299 TTATGCGAGTGTTTGGGCGTCAAGCCCTCCCACGTAATGAAAGTGAACGGAGGTGAGAGC 617240 Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA-- 559 || | ||||||| ||||||||| |||||||||||||| || |||||||||||||| Sbjct 617239 CCTTACGGGTGCATCATCGACCGGCCCTGATGTCTTCGGGCGGGTTTGAGTAAGAGCATA 617180 Query 560 --TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 || ||||| |||| ||||| || ||||| ||||| || |||||||||||||||||||| Sbjct 617179 CCTAACTGTTCGGACGCGAAATATTGTGAATTATGCGTGGATAGGGTGAAGCCAGAGGAA 617120 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662 |||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 617119 ACTCTGGTGGCGGCTCGCAGCGGTTCCGGCGTGCAAATCGATCGT 617075 >seq13 Length=962158 Score = 156 bits (172), Expect = 2e-35 Identities = 177/234 (76%), Gaps = 5/234 (2%) Strand=Plus/Minus Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 || || ||||| ||| | || | | |||||||||| || ||| |||||| ||| || Sbjct 60114 AGTATACTGGCAAAATAGCCGTGAACTGCCCGTCTTGAAATACGAACCAAGTAGTAGAAT 60055 Query 440 ATCT--ATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGG 497 || | ||| |||||||||||||| ||| || | |||||||||| |||| | ||| Sbjct 60054 ATATTCATGTGAGTGTTTGGGTGTTAAAACCTCCTGTGTAATGAAAGCCAACGCAAGTGA 59995 Query 498 GAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAG 557 | ||| | || ||||| ||||||||||||||| | | ||||||||||||| || |||| Sbjct 59994 G--CCCTTCAGAGTGCATCATCGACCGATCCTGGTTTTCTCGGATGGATTTGTGTCAGAG 59937 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCA 611 || ||||||| | ||| |||||||| | |||||| | |||||||||| ||| Sbjct 59936 CAAAGCTGTTCTGGCCC-AAAGATGGCAACCTATGCGTAGATAGGGTGAATCCA 59884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079997769200