Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1080083 89.7 6e-16 seq2557 84.2 2e-14 seq127563 82.4 9e-14 seq1966322 80.6 3e-13 seq383506 80.6 3e-13 seq4389519 78.8 1e-12 seq4871581 73.4 4e-11 >seq1080083 Length=1088 Score = 89.7 bits (98), Expect = 6e-16 Identities = 86/108 (80%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| | | | ||||||||| |||||||||||| ||||| ||| Sbjct 835 AAACCAACAAAATAGAAATGAA-GTCCTATTCCATTATTCCATGCACCATTATTCAGGCT 893 Query 70 TAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | ||||||||||| ||||| |||||| |||| ||||| || ||||| Sbjct 894 ACACGCCTGCTTTGAGCACTCAAATTTTTTCAAAGTAAATGTGCTGGT 941 >seq2557 Length=244956 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| | | | ||||||||| |||||||||||| ||||| ||| Sbjct 109076 AAACCAACAAAATAGAAATGAA-GTCCTATTCCATTATTCCATGCACCATTATTCAGGCT 109018 Query 70 TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | |||||||||| |||||||||||| || | ||||| || ||||| Sbjct 109017 ACACACCTGCTTTGAGCACTCTAATTTTTTCTAAGTAAATGTGCTGGT 108970 >seq127563 Length=113362 Score = 82.4 bits (90), Expect = 9e-14 Identities = 84/107 (79%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 11 AACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT 70 |||||||||||||| ||| | ||||||||| ||| ||||||| ||| | ||| Sbjct 112047 AACCAACAAAATAGAAACGAA-GTCCTATTCCATTGTTCCATGTGCCATTATCCAGGCTA 111989 Query 71 AA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGT 116 | ||||||||||| |||||||||||| |||| |||||||| | ||| Sbjct 111988 CACGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAAAGTTCCGGT 111942 >seq1966322 Length=226 Score = 80.6 bits (88), Expect = 3e-13 Identities = 84/106 (79%), Gaps = 7/106 (7%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT--GTATTCGGG 67 ||||||||||||||| || | ||||||||| |||||||||||| | | |||||| || Sbjct 115 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGC-ACTCAGTATTCAGG 58 Query 68 CGTAAGC---CTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || | || ||||||| | ||||||||||| |||| ||||| || Sbjct 57 CGGATGCTGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 12 >seq383506 Length=1858 Score = 80.6 bits (88), Expect = 3e-13 Identities = 91/114 (80%), Gaps = 6/114 (5%) Strand=Plus/Plus Query 1 CGTCTCTAGAAA-CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGC-TAAT 58 ||| | | |||| |||||| | ||| ||| | ||| ||||| |||||||||||| | || Sbjct 1656 CGTATTTCGAAAGCCAACAGAGTAGAAACGAA-GTCATATTCCATTATTCCATGCATCAT 1714 Query 59 GTATTCGGGC-GTAAGCCTGCTTTGAACACTCTAATTT-TCTCAAGGTAAAAGT 110 ||||| ||| ||| ||||||||||| ||||||||||| | |||| ||||| || Sbjct 1715 -TATTCAGGCTGTATGCCTGCTTTGATCACTCTAATTTGTTTCAAAGTAAACGT 1767 >seq4389519 Length=541 Score = 78.8 bits (86), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 4/104 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAAT-GTATTCGGGC 68 ||||||||||||||| || | ||||||||| |||||||||||| | |||||| ||| Sbjct 187 AAACCAACAAAATAGAACCG-AGGTCCTATTCCATTATTCCATGCACACAGTATTCAGGC 245 Query 69 GTAA--GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||| | ||||||||||| |||| ||||| || Sbjct 246 GGGCTTGCCTGCTTTAAGCACTCTAATTTGTTCAAAGTAAACGT 289 >seq4871581 Length=1067 Score = 73.4 bits (80), Expect = 4e-11 Identities = 79/102 (77%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| | | | ||||||||| ||||||||||| ||||| || Sbjct 38 AAACCAACAAAATAGAAATGAA-GTCCTATTCCATTATTCCATGACCCGCTATTCACGCT 96 Query 70 T-AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || || ||||||| |||||||||||| |||| ||||| || Sbjct 97 ACAATCCAGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566447408550