Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq1966322 114 1e-23 seq4389519 113 4e-23 seq127563 95.1 1e-17 seq1080083 89.7 5e-16 seq2557 84.2 2e-14 seq4871581 78.8 9e-13 seq596698 78.8 9e-13 >seq1966322 Length=226 Score = 114 bits (126), Expect = 1e-23 Identities = 140/185 (76%), Gaps = 11/185 (6%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTAC 66 || ||||||||||| ||||||||| | | ||||||||| | || |||||| | | Sbjct 12 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCAGCATCCGCCTGAATAC-TGAG 70 Query 67 --CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG- 123 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| |||| Sbjct 71 TGCATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTT-TCGGAATCCCCGA 128 Query 124 --TAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||| |||| ||| || |||||| | ||||| || | |||||||||||| Sbjct 129 GGTAATGATCAATAGGGACAGACGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 188 Query 182 TGGAT 186 ||||| Sbjct 189 TGGAT 193 >seq4389519 Length=541 Score = 113 bits (124), Expect = 4e-23 Identities = 135/180 (75%), Gaps = 4/180 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC--GAATACATTAC- 66 || ||||||||||| ||||||||| | | ||||||||| | | |||||| | Sbjct 289 ACGTTTACTTTGAACAAATTAGAGTGCTTAAAGCAGGCAAGCCCGCCTGAATACTGTGTG 230 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 ||||||||||| ||||||||| | |||||||||||||| ||||| | ||| |||| Sbjct 229 CATGGAATAATGGAATAGGACCT-CGGTTCTATTTTGTTGGTTTTCGGAACCCGAGGTAA 171 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| |||| ||| || |||||| | ||||| || | ||||||||||||||||| Sbjct 170 TGATTAATAGGGACAGGCGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGAT 111 >seq127563 Length=113362 Score = 95.1 bits (104), Expect = 1e-17 Identities = 139/186 (75%), Gaps = 8/186 (4%) Strand=Plus/Plus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 ||| | |||||||||||||||||||||||| | ||||||||||| | | || | ||| | Sbjct 111942 ACCGGAACTTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCGTGTAGCCTGGATA-A 112000 Query 63 TTAC-CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 | | ||||||| ||| ||||||||| | || ||||||||||| || |||| ||| | Sbjct 112001 TGGCACATGGAACAATGGAATAGGAC-TTCGTTTCTATTTTGTTGG-TTCTGGGAATACA 112058 Query 122 CG-TAATGATAAATACGGATAGTCGGGGGTGTCAGTATT-CAATTGTCAAAGGTGAAATT 179 | ||||||| || | ||| | || ||| | | ||| | | | | | || ||||||| Sbjct 112059 AGATAATGATTAAGAGGGACGGACGAGGGCATTCGGATTGCGACTCT-AGAGATGAAATT 112117 Query 180 CTTGGA 185 |||||| Sbjct 112118 CTTGGA 112123 >seq1080083 Length=1088 Score = 89.7 bits (98), Expect = 5e-16 Identities = 86/108 (80%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 ||||| || ||||||||||||||||| ||| | ||||||||||| | | || ||||| Sbjct 941 ACCAGCACATTTACTTTGAAAAAATTTGAGTGCTCAAAGCAGGCGTGTAGCCTGAATAAT 882 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||||| ||||||||| | | ||||||||||| ||||| Sbjct 881 GGTGCATGGAATAATGGAATAGGAC-TTCATTTCTATTTTGTTGGTTT 835 >seq2557 Length=244956 Score = 84.2 bits (92), Expect = 2e-14 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 4 ACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACA 62 ||||| || ||||||| ||||||||||||| | |||||||||| | | || ||||| Sbjct 108970 ACCAGCACATTTACTTAGAAAAAATTAGAGTGCTCAAAGCAGGTGTGTAGCCTGAATAAT 109029 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||||| ||||||||| | | ||||||||||| ||||| Sbjct 109030 GGTGCATGGAATAATGGAATAGGAC-TTCATTTCTATTTTGTTGGTTT 109076 >seq4871581 Length=1067 Score = 78.8 bits (86), Expect = 9e-13 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68 || ||||||||||||||||||||| | ||||||| || | | || ||||| || Sbjct 138 ACGTTTACTTTGAAAAAATTAGAGTGCTCAAAGCTGGATTGTAGCGTGAATAGCGGGTCA 79 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||||||||| | | ||||||||||| ||||| Sbjct 78 TGGAATAATGGAATAGGAC-TTCATTTCTATTTTGTTGGTTT 38 >seq596698 Length=42927 Score = 78.8 bits (86), Expect = 9e-13 Identities = 80/102 (78%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCA 68 || |||||||||||||||| |||| ||||||||||| | | | ||||| | || Sbjct 31073 ACATTTACTTTGAAAAAATCAGAGAACTCAAAGCAGGCATGTAACCTGAATAATGGAACA 31014 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||||| ||||||||| | | ||||||||||| ||||| Sbjct 31013 TGGAATAATGGAATAGGAC-TTTGTTTCTATTTTGTTGGTTT 30973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487266588000