Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq43927 86.0 1e-14 seq240992 84.2 3e-14 seq4842460 82.4 1e-13 seq4317721 82.4 1e-13 seq286914 82.4 1e-13 seq202524 82.4 1e-13 seq41529 78.8 1e-12 seq18000 78.8 1e-12 seq464311 75.2 2e-11 seq179471 75.2 2e-11 seq22256 75.2 2e-11 seq1156 75.2 2e-11 seq532775 73.4 6e-11 >seq43927 Length=226976 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | ||||| || | || || | |||| Sbjct 24470 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCTTGGTCGAGTAACCAGT 24527 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 24528 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 24581 >seq240992 Length=1868 Score = 84.2 bits (92), Expect = 3e-14 Identities = 93/119 (78%), Gaps = 10/119 (8%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTT--TTTGC--GGCTGTCTGACCAGG 56 |||||||||||||||| | ||| || | ||||| | ||| || || ||||||| Sbjct 1413 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGTGCTTGGTTGAGTGACCAG- 1357 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCA 115 || |||||||||||||| | |||||||| ||||||||||||||||||||||||| Sbjct 1356 ---TGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCCA 1301 >seq4842460 Length=988 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 611 CAGTGGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 668 >seq4317721 Length=511 Score = 82.4 bits (90), Expect = 1e-13 Identities = 90/116 (78%), Gaps = 8/116 (7%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGC--GGCTGTCTGACCAGGCA 58 |||||||||||||||| | ||| || | ||||| ||| || | |||| || Sbjct 398 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATGCTTGGTCGAGTGACTAG--- 344 Query 59 GTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 || ||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 343 -TGGCGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 289 >seq286914 Length=18223 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| ||||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 5308 CAGTGGCGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 5365 >seq202524 Length=24547 Score = 82.4 bits (90), Expect = 1e-13 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1717 CAGTGATGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1660 >seq41529 Length=77786 Score = 78.8 bits (86), Expect = 1e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 22574 CAGTGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 22631 >seq18000 Length=192884 Score = 78.8 bits (86), Expect = 1e-12 Identities = 92/118 (78%), Gaps = 10/118 (8%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTT--TTTGC--GGCTGTCTGACCAGG 56 |||||||||||||||| | ||| || | ||||| | ||| || | ||||||| Sbjct 945 GTACGAGAGGAACCGCAGG-TTCGGAC-ACTTGGTACATATGCTTGGTCGAGTGACCAG- 889 Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||| |||||||||||||| |||||||| ||||||||||||||||||||| || Sbjct 888 CGGTGC---GAAGCTACCATCTGTCGGATTATGACTGAACGCCTCTAAGTCAGAACCC 834 >seq464311 Length=765 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 ||||| |||||||||||||| | |||||||| |||||||||||||||||||||| Sbjct 516 CAGTGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAAT 571 >seq179471 Length=33658 Score = 75.2 bits (82), Expect = 2e-11 Identities = 57/65 (88%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 ||||| |||||| ||||||||| ||||||||| ||||||||||||||||||||| ||| Sbjct 26741 CAGTGGTGCGAAGGTACCATCTG-TGGATTATGATTGAACGCCTCTAAGTCAGAATGCAT 26799 Query 117 GCCAG 121 |||| Sbjct 26800 -CCAG 26803 >seq22256 Length=302597 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 56 GCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||| |||||||||||||| | |||||||| ||||||||||||||| |||||||| Sbjct 184355 GCAGTGGTGCGAAGCTACCATCGGTGGGATTATGACTGAACGCCTCTAAGACAGAATCC 184413 >seq1156 Length=1006 Score = 75.2 bits (82), Expect = 2e-11 Identities = 47/51 (92%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 140 GCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 90 >seq532775 Length=8316 Score = 73.4 bits (80), Expect = 6e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 57 CAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||| |||||||||||||| | |||||||| |||||||||| ||||||||||||| Sbjct 3332 CAGTGGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTGTAAGTCAGAATCC 3389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779626540800