Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthoscurria_20geniculata_20[genbank_20GCA_5F000661875.1_202014- 04-29] 4,986,575 sequences; 7,178,402,394 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq438317 109 4e-19 seq70167 105 5e-18 seq17242 98.7 7e-16 seq780981 87.8 1e-12 seq3622457 84.2 2e-11 >seq438317 Length=14545 Score = 109 bits (120), Expect = 4e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 |||||||| | |||| ||| |||||| | || || ||| | ||||||||||||||| | Sbjct 3644 ATGAACCCTTGTTGCGAGATAATCCTAGACGATTTGTAATTTTCCCCATCGAGTATCCTG 3585 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 ||||||||| |||||||| ||||| ||||| || || ||||| | || || || ||| Sbjct 3584 ATATTTGGCAAATGTACAAGAAGGCAGAAGCATCATTTTGGACTGCTGAAGAAGTGGATC 3525 Query 61145 TGTCCAAAGACATGAATGACTGGGAGCGTTT---ATCGAGCGGTGAACAACATTTCATTA 61201 | || ||||| | |||||||| | || ||| | ||| ||||||||| Sbjct 3524 TCTCAAAAGATTTAGCTGACTGGGGGAAATTAAAATCTA---CAGAAAGGCATTTCATTT 3468 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAAT 61251 ||| | | || || ||||| ||| || ||||| || ||||| ||| Sbjct 3467 CGCATATCCTAGCCTTTTTTGCTGCTAGTGATGGTATTGTTAATGAAAAT 3418 >seq70167 Length=66857 Score = 105 bits (116), Expect = 5e-18 Identities = 137/188 (73%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 66045 GAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCT 66104 |||| |||| || |||||||| || || ||||||||||| ||||| || || || | Sbjct 49972 GAGCTGTAT--TCAACAATTTCTGTACATAGATTACTGCACTTGATGGTTCCTAAGTTTT 50029 Query 66105 GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAA 66164 | ||||| || || || |||||||| || || | |||||| |||||||| || |||| Sbjct 50030 GCTGATTTGATTTACGGTTACATGCATCTTTATAGAGCATGTAAGGAGTGCCAGTTTCAA 50089 Query 66165 CTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTAC----GTACCGCC 66220 || || ||||| ||||| | ||| | || | || |||||| || |||||||| Sbjct 50090 TCTGAGAGTCAATAATGGCATACCATAAAGACTGGGCTTTCACCTGACTTCGGTACCGCC 50149 Query 66221 CTACCTTT 66228 || ||||| Sbjct 50150 CTTCCTTT 50157 >seq17242 Length=2525 Score = 98.7 bits (108), Expect = 7e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 61397 TGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATT 61456 ||||||||||||| || || | || | ||| ||| || | |||||| || || | Sbjct 1997 TGTTCAATGCCATTGAAACTCTCCCATGTATTAAGAAGAAGGCTGTTTGGGCTTTGAACT 2056 Query 61457 GGATCACCAGTACAACGGCTACATTTGGTGAACGA-TTGCTGGCATTTGCGGTGGTCGAG 61515 |||| | || | || ||||||||||| || | ||| || ||||| | || || Sbjct 2057 GGATTAATCACACTAATGCATCATTTGGTGAAAGAGTAGCT-GCTTTTGCTGCTGTTGAA 2115 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || | || ||| ||| || ||||| |||| |||||| | |||||| | ||||||||| Sbjct 2116 GGAATTTTCTTCTCTGGTTCCTTTGCGTCAATATTTTGGCTTAAGAAAAGAGGACTTATG 2175 Query 61576 CCCGGTCTGACCTTCAGCAATGA 61598 || ||||| |||||||| ||||| Sbjct 2176 CCAGGTCTTACCTTCAGTAATGA 2198 >seq780981 Length=1727 Score = 87.8 bits (96), Expect = 1e-12 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 61478 CATTTGGTGAACGA-TTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 ||||||||||| || | ||| || ||||| | || || || | || ||| ||| || Sbjct 8 CATTTGGTGAAAGAGTAGCT-GCTTTTGCTGCTGTTGAAGGAATTTTCTTCTCTGGTTCC 66 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 ||||| |||| |||||| | |||||| | ||||||||||| ||||| |||||||| ||| Sbjct 67 TTTGCATCAATATTTTGGCTTAAGAAAAGAGGACTTATGCCAGGTCTTACCTTCAGTAAT 126 Query 61597 GA 61598 || Sbjct 127 GA 128 >seq3622457 Length=345 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 66321 CATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGC 66380 |||||| ||| || | ||| || ||||| || ||||| ||||| ||||| ||||| | Sbjct 205 CATCCTTTTCCACTCTGTTCATGAAGAGATCTGGGATCCACAGGGCATAGAACAGATCAC 264 Query 66381 GTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGG 66440 | |||| ||||| || ||| |||||| ||||| | ||| |||||| || | Sbjct 265 GAGCTCTATGCTCTTCTGAGCCAGTATTTTTCTTTAAGTCCAAGAAACTAAAGATATCTG 324 Query 66441 CATGCCATGGTTCCAGGTAGA 66461 | ||||||||||||| ||||| Sbjct 325 CGTGCCATGGTTCCAAGTAGA 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 373406248958000