Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq55413 176 7e-42 >seq55413 Length=627 Score = 176 bits (194), Expect = 7e-42 Identities = 174/220 (79%), Gaps = 5/220 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| |||||||||||| ||||||||||||| |||||||||||||||| |||| ||| Sbjct 172 GTACAAGAGGCAGGGACGTAATCAACGCGAGCTT-ATGACTCGCGCTTACTGGGAA-TTC 229 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||| ||| || |||| |||| ||||||| ||||||| ||| |||| | || Sbjct 230 CTCGTTCAAGGGGAATAATTACAATCCCCTATCCCAATCACGAAGAAGGTTCATTGGGTT 289 Query 120 ACCCGGACCTGTCGGCCAAGGT--GATAGACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||| | || | | |||| | | | || ||| || ||||||||||||||||| Sbjct 290 TCCCACTCTTGACAGAGTAGGTTGAACATGCACGCTGATCACTTCAGTGTAGCGCGCGTG 349 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||| | ||||||||||||||||||||||||||||||| Sbjct 350 CGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751589526675