Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq55851 143 1e-31 seq54855 86.0 3e-14 >seq55851 Length=658 Score = 143 bits (158), Expect = 1e-31 Identities = 103/119 (87%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||| |||||||||||||||||||||||||| | | |||||||||||||||||||| Sbjct 264 GTTGGTACCCGAAAGATGGTGAACTATGCCTGGGCAAGACGAAGCCAGAGGAAACTCTGG 205 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||| | |||| ||||| |||||||||||||||||| | ||||||||||||||| Sbjct 204 TGGAGGTCTGTAGCGATTCTGACGTGCAAATCGATCGTCAGACCTGGGTATAGGGGCGA 146 >seq54855 Length=316 Score = 86.0 bits (94), Expect = 3e-14 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 76 GGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGAT 135 |||||| | | |||| |||||||||| |||||||||||| ||||||| |||| Sbjct 315 GGTAAACTCCACCTAAGGCTAAATATTACAGCGAGACCGATAGCAAACAAGTACCGTGAG 256 Query 136 CGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 ||||| || |||| |||||| | |||||||| || || |||||||| Sbjct 255 GGAAAGTTGCAAAGAACTTTGAAGAGAGAGTTCAATAGGACGTGAAA 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078791399750