Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq9107 313 5e-83 >seq9107 Length=87930 Score = 313 bits (346), Expect = 5e-83 Identities = 280/350 (80%), Gaps = 16/350 (5%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| ||| || ||||||| |||||||||||||| ||||| ||||||||| ||||| Sbjct 55378 CTTTACAACCCGGAGGCCTTCTT-CACACACGCGGCAT-GGCTGCATCAGGCTTGCGCCC 55321 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55320 ATTGTGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 55261 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| |||||||||||||||| || ||||||| |||| ||||||||||||||||| Sbjct 55260 TGTGGCTGGCCATCCTCTCAGACCAGCTAGGGATCGTAGCCTCGGTGAGCCATTACCTCA 55201 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCC----- 235 || |||||||||||| || || ||||||||| || ||||| ||||||| Sbjct 55200 CCGACTAGCTAATCCCGTCTGGGTTCATCTGATGGCATGAGGCCAATTGGTCCCCCATTT 55141 Query 236 TGCTT---------TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTA 286 || || || || |||||||||||||| |||||| | |||| Sbjct 55140 TGGTTGAATAACAGAAGCCAGTCAACTTTATGCGGTATTAGCTATCGTTTCTAATAGTTA 55081 Query 287 TCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 |||||| | ||||||||||| || || |||||||||||||||||||| Sbjct 55080 TCCCCCTCCACCAGGCAGATCCCCAGATTATACTCACCCGTCCGCCGCTC 55031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071395981600