Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq9107 407 4e-111 seq54855 75.2 3e-11 >seq9107 Length=87930 Score = 407 bits (450), Expect = 4e-111 Identities = 351/417 (84%), Gaps = 16/417 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| ||| | | ||||||||| ||||||||||||||||||| ||| ||| Sbjct 57704 CCACAGGTCAT-CCGTTGA-TTTTTCAACATCAGTCGGTTCGGTCCTCCAGCCAGT-GTT 57648 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||||| |||| |||||||||||| || |||||| || ||||| ||||||| | ||| | Sbjct 57647 ACCCAGCCTT-CAACCTGCCCAT-GGCTAGATCACCGGGTTT-CGGGTCTGTATCCT-GA 57592 Query 129 GACTAGAC-GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT-ATTCGGTTAAGCTT 186 ||| | |||||| ||||||||| ||| | ||||| ||||||| || ||||||| || Sbjct 57591 AACTCATCTGCCCTATTAAGACTCGGTTTCC-CTACGGCTCCCCTTATACGGTTAACCTC 57533 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAAC---AA 243 || || ||| | || ||||||||||||||||||||||||||||||||||| || || Sbjct 57532 -GCTACAGAATACAACTCGCTGACCCATTATACAAAAGGTACGCAGTCACCTCACTAAAA 57474 Query 244 AGTG-GGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 || ||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct 57473 AGAAAGGCTCCCACTGCTTGTACGTACAGGGTTTCAGGATCTATTTCACTCCCCTC-CCG 57415 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 ||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 57414 GGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTA 57355 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||||||||||||||||||||| |||| ||| | ||||||| ||| ||||||| Sbjct 57354 GCCTTGGAGGATGGTCCCCCCATCTTCAAACAGGATGTCTCGTGTCCCGCCCTACTC 57298 >seq54855 Length=316 Score = 75.2 bits (82), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 1/101 (1%) Strand=Plus/Plus Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 || ||||||||| | ||||| |||| | ||| | ||||||| | ||||||||||| Sbjct 202 CAAACGGTTTCACGTCCTATTGAACTCTC-TCTTCAAAGTTCTTTGCAACTTTCCCTCAC 260 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 |||||| ||| ||||||||| | ||| ||||||||||| Sbjct 261 GGTACTTGTTTGCTATCGGTCTCGCTGTAATATTTAGCCTT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1240900420480