Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Achipteria_20coleoptrata_20[genbank_20GCA_5F000988765.1_202015-05- 06] 56,345 sequences; 88,443,889 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq54283 288 3e-75 seq54812 235 2e-59 >seq54283 Length=1144 Score = 288 bits (318), Expect = 3e-75 Identities = 314/420 (75%), Gaps = 38/420 (9%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| ||||||| ||| |||| ||||||||||||||||||| Sbjct 728 CTTTTGCTCTACGTGAGGTTTCTGTCCTCACTGAGCTAGCCTTAGGACACCTGCGTTACC 787 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||| |||||||| ||||||||| |||||||||| ||||| | |||| || ||||| Sbjct 788 TTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGAAACTGTCCTCGGAGGGGATC 847 Query 127 GGCCCGCG-------------AAGGAC-----------------CTTAACGCCAGAAAA- 155 | |||| ||||| ||| | | ||||| Sbjct 848 GTGCCGCAGTGAGCAAACCACAAGGATTATGCCCACCTCGTACACTTGATTCAAGAAACG 907 Query 156 TGGT--CGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTG 213 ||| | ||| | |||| ||| | || | |||||| |||| || | |||||| Sbjct 908 TGGAACCATTGATTCCGCTTTCCACTTAACCGAGTCAGTAAAGAAACTATGAAAGTAGTG 967 Query 214 GTATTTCACTTGCGCCGAAACGG--CTCCCACTTATTCTACACCTCTCAAGTCATTTCAC 271 ||||||||| || |||| | ||||||||||| |||||||||||| ||| ||||| Sbjct 968 GTATTTCAC---CGGCGAATTGCTTCTCCCACTTATGCTACACCTCTCATGTCTCTTCAC 1024 Query 272 AAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCC 331 | | || |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1025 AGATTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCC 1084 Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1085 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTGATCC 1144 >seq54812 Length=1268 Score = 235 bits (260), Expect = 2e-59 Identities = 138/143 (97%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 391 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGT 60 Query 451 TACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGG 510 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||| Sbjct 61 TACTCCCGCCGTTTAGTAGCGCTTGGTTGAATTTCTTCACTTTGACATTCATACCACTGG 120 Query 511 GCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||| Sbjct 121 GCAGAAATCACATTGCGTCAACA 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634278646560